RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 SIX3O95343 332 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 IGHG3P01860 377 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 ALDOAP04075 364 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 ENDOUP21128 410 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 CPN2P22792 545 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 BSGP35613 385 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 MAGEA5P43359 124 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 STT3AP46977 705 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 RPS13P62277 151 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 FOLH1Q04609 750 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 ASPHQ12797 758 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 ILF2Q12905 390 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 SLAMF1Q13291 335 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 SETDB1Q15047 1291 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 ZNF791Q3KP31 576 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 TMEM35AQ53FP2 167 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 PIGGQ5H8A4 983 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 PAGE2BQ5JRK9 111 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 MROH9Q5TGP6 573 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 SYT10Q6XYQ8 523 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 RAPH1Q70E73 1250 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 CCDC71Q8IV32 467 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 GPALPP1Q8IXQ4 340 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 TEX9Q8N6V9 391 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 OR8K3Q8NH51 312 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 WDR20Q8TBZ3 569 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 DAZLQ92904 295 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 MRRFQ96E11 262 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 SENP5Q96HI0 755 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 MTERF1Q99551 399 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 SPOCK3Q9BQ16 436 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 CCDC77Q9BR77 488 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 NMRAL1Q9HBL8 299 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 SNX15Q9NRS6 342 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 TUBA8Q9NY65 449 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 ASB4Q9Y574 426 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 FAM215AQ9Y5M1 114 aa12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 INTS1Q8N201 2190 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-241ENST00000626948 A0A1B0GTL3 188 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 A0A1W2PR48 441 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 NPIPA2E9PIF3 369 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 NPIPA3F8WFD2 350 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 PROM1O43490 865 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 TOXO94900 526 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 RFPL3SP0C7P2 107 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 CNR1P21554 472 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 CRABP2P29373 138 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 PIGAP37287 484 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 SSR2P43308 183 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 PIK3CGP48736 1102 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 NEK2P51955 445 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 NUP107P57740 925 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 ETF1P62495 437 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 DDX39BQ13838 428 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 SERTAD2Q14140 314 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 HIST2H2ACQ16777 129 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 PFKFB4Q16877 469 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 AP5B1Q2VPB7 878 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 GXYLT1Q4G148 440 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 HIST2H2AA3Q6FI13 130 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 ARHGAP11AQ6P4F7 1023 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 TBC1D1Q86TI0 1168 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 OR5M9Q8NGP3 310 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 RHEBL1Q8TAI7 183 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 CMTM7Q96FZ5 175 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 LRRC1Q9BTT6 524 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 RPF2Q9H7B2 306 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 ACOT9Q9Y305 439 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 RNF11Q9Y3C5 154 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 TSC22D4Q9Y3Q8 395 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 FREM3P0C091 2139 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 NINQ8N4C6 2090 aa12.49□□□□□ -0.41
SOX2-OT-241ENST00000626948 A0A0A6YYD5 115 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 A0A1B0GVC2 190 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 LRRC3CA6NJW4 275 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 GLOD5A6NK44 160 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 OR7A17O14581 309 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 S100BP04271 92 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 EPB42P16452 691 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 TNNI3P19429 210 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 HPDP32754 393 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 STX2P32856 288 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 SOX18P35713 384 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 PIK3CBP42338 1070 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 TNFRSF17Q02223 184 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 TGM3Q08188 693 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 PCBP2Q15366 365 aaKnown RBP eCLIP12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 TESK1Q15569 626 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 MPEG1Q2M385 716 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 HYAL4Q2M3T9 481 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 TECRLQ5HYJ1 363 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 MEX3BQ6ZN04 569 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 RTL4Q6ZR62 310 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 CHSY3Q70JA7 882 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 TRILQ7L0X0 811 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 GOLGA7Q7Z5G4 137 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 LIX1LQ8IVB5 337 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 ZCCHC7Q8N3Z6 543 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 GOLM1Q8NBJ4 401 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms