RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 ZNF473Q8WTR7 871 aaKnown RBP13.36□□□□□ -0.27
TUBB3-215ENST00000625617 ANKRD9Q96BM1 317 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-215ENST00000625617 SPACA9Q96E40 222 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-215ENST00000625617 ART5Q96L15 291 aa13.36□□□□□ -0.27
TUBB3-215ENST00000625617 GPR22Q99680 433 aa13.36□□□□□ -0.27
TUBB3-215ENST00000625617 SEMA4BQ9NPR2 832 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-215ENST00000625617 SMYD2Q9NRG4 433 aa13.36□□□□□ -0.27
TUBB3-215ENST00000625617 TRMT1Q9NXH9 659 aaKnown RBP13.36□□□□□ -0.27
TUBB3-215ENST00000625617 ALKBH4Q9NXW9 302 aa13.36□□□□□ -0.27
TUBB3-215ENST00000625617 SPRR3Q9UBC9 169 aa13.36□□□□□ -0.27
TUBB3-215ENST00000625617 PTBP2Q9UKA9 531 aaKnown RBP13.36□□□□□ -0.27
TUBB3-215ENST00000625617 RNF112Q9ULX5 631 aa13.36□□□□□ -0.27
TUBB3-215ENST00000625617 BOKQ9UMX3 212 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-215ENST00000625617 MTO1Q9Y2Z2 717 aaKnown RBP13.36□□□□□ -0.27
TUBB3-215ENST00000625617 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.36□□□□□ -0.27
TUBB3-215ENST00000625617 DIAPH2O60879 1101 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 SH3BGRLO75368 114 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 NADKO95544 446 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-215ENST00000625617 IGKV3-11P04433 115 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 ENDOUP21128 410 aaKnown RBP13.35□□□□□ -0.27
TUBB3-215ENST00000625617 SERPINB1P30740 379 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 IST1P53990 364 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 DLX5P56178 289 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 IGLV3-21P80748 117 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-215ENST00000625617 TBL3Q12788 808 aaKnown RBP13.35□□□□□ -0.27
TUBB3-215ENST00000625617 ZNF791Q3KP31 576 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-215ENST00000625617 KRTAP21-3Q3LHN1 58 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 PIGGQ5H8A4 983 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 RIPPLY2Q5TAB7 128 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 PRAMEF20Q5VT98 475 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 SLC22A10Q63ZE4 541 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 MED27Q6P2C8 311 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 CHSY3Q70JA7 882 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 LIX1LQ8IVB5 337 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 ZZZ3Q8IYH5 903 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 PAQR8Q8TEZ7 354 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 PYROXD1Q8WU10 500 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 NINJ1Q92982 152 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 SENP5Q96HI0 755 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-215ENST00000625617 FBXL20Q96IG2 436 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 RBBP8Q99708 897 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 CPNE1Q99829 537 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 CNPPD1Q9BV87 410 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 SH2D2AQ9NP31 389 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.35□□□□□ -0.27
TUBB3-215ENST00000625617 DNAJB12Q9NXW2 375 aaKnown RBP13.35□□□□□ -0.27
TUBB3-215ENST00000625617 B4GALT7Q9UBV7 327 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 SPG11Q96JI7 2443 aa13.35□□□□□ -0.27
TUBB3-215ENST00000625617 INTS1Q8N201 2190 aaKnown RBP13.35□□□□□ -0.27
TUBB3-215ENST00000625617 MED13LQ71F56 2210 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 LRRC3CA6NJW4 275 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 CXorf49A8MYA2 514 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 CCDC188H7C350 402 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 SAP18O00422 153 aaKnown RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 TGFB1P01137 390 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 GP5P40197 560 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 CASP2P42575 452 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 RPL21P46778 160 aaKnown RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 RAP1GDS1P52306 607 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 TNFRSF17Q02223 184 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 DDX39BQ13838 428 aaKnown RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 E2F2Q14209 437 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 ZKSCAN8Q15776 578 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 KHDRBS2Q5VWX1 349 aaKnown RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 ADGRD1Q6QNK2 874 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 ARSKQ6UWY0 536 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 CREG2Q8IUH2 290 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 OR4N5Q8IXE1 308 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 LAS2Q8IYD9 372 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 DND1Q8IYX4 353 aaKnown RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 FBXW8Q8N3Y1 598 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 SLC15A4Q8N697 577 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 BBOF1Q8ND07 529 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 FAM13CQ8NE31 585 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 CHDHQ8NE62 594 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 CMTM7Q96FZ5 175 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 GAL3ST4Q96RP7 486 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 CENPKQ9BS16 269 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 CD244Q9BZW8 370 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 SLC6A15Q9H2J7 730 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 RPF2Q9H7B2 306 aaKnown RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 ZFP64Q9NPA5 681 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 MS4A12Q9NXJ0 267 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 NUDT4Q9NZJ9 180 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 PHF11Q9UIL8 331 aa13.34□□□□□ -0.27
TUBB3-215ENST00000625617 SETD2Q9BYW2 2564 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-215ENST00000625617 SUPT3HB4E1H0 165 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 SUPT3HO75486 399 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 CTAG2O75638 210 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 CD99P14209 185 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 SSTR1P30872 391 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 PEX19P40855 299 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 RAB10P61026 200 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 SLAMF1Q13291 335 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 LYPD8Q6UX82 237 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 SLC29A4Q7RTT9 530 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 LRRC25Q8N386 305 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-215ENST00000625617 LIX1Q8N485 282 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 OR7G3Q8NG95 312 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms