RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FEVQ99581 238 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 GLIPR2Q9H4G4 154 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 ZNF624Q9P2J8 865 aaPredicted RBP18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 KLF15Q9UIH9 416 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 SH3GLB1Q9Y371 365 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 MDC1Q14676 2089 aaKnown RBP18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 H3BMQ9 156 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 HMGN4O00479 90 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 TNFRSF10CO14798 259 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 BCHEP06276 602 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 JUNDP17535 347 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 ATP5A1P25705 553 aaKnown RBP18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 CDH12P55289 794 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 RPP38P78345 283 aaKnown RBP18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 DUSP7Q16829 419 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 MICAQ29983 383 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 CYP27C1Q4G0S4 372 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 TOR1AIP1Q5JTV8 583 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 EOGTQ5NDL2 527 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 RD3Q7Z3Z2 195 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 ACOT4Q8N9L9 421 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 SRFBP1Q8NEF9 429 aaKnown RBP18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 OR10G2Q8NGC3 310 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 OR8K5Q8NH50 307 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 TMEM19Q96HH6 336 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 COG8Q96MW5 612 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 PIP5K1AQ99755 562 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 TIMMDC1Q9NPL8 285 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 ZSCAN32Q9NX65 697 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 SNX5Q9Y5X3 404 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 ENPP4Q9Y6X5 453 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 A0A1W2PPC1 479 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 LRRC72A6NJI9 287 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 A8MVJ9 347 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 PTGES3LE9PB15 166 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 GUCY1B2O75343 617 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 RECKO95980 971 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 ANXA8P13928 327 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 TSFMP43897 325 aaKnown RBP18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 ZNF605Q86T29 641 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 CCL4L1Q8NHW4 92 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 HRASLS5Q96KN8 279 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 LHPPQ9H008 270 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 SYNPO2LQ9H987 977 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 PNMA8BQ9ULN7 279 aaPredicted RBP18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 PCDHGA2Q9Y5H1 932 aa18.68■□□□□ 0.58
PCDHB11-202ENST00000624887 TRIM64BA6NI03 449 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 J3KTA2 159 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 XPNPEP2O43895 674 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 SH3BP5O60239 455 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 MATN1P21941 496 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 ACTR1BP42025 376 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 HMGA2P52926 109 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 ACTR1AP61163 376 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 KCNC4Q03721 635 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 PIGFQ07326 219 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 MAD2L1BPQ15013 274 aaPredicted RBP18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 TCEA2Q15560 299 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 MAPK11Q15759 364 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 EXOC3L2Q2M3D2 409 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 TBC1D25Q3MII6 688 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 RPS26P11Q5JNZ5 115 aaPredicted RBP18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 CCDC71Q8IV32 467 aaPredicted RBP18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 SLC5A8Q8N695 610 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 OR52J3Q8NH60 311 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 APOBEC4Q8WW27 367 aaKnown RBP18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 DNASE1L2Q92874 299 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 RAB8BQ92930 207 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 TMEM168Q9H0V1 697 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 ACER3Q9NUN7 267 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 KLHL20Q9Y2M5 609 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 FAM32AQ9Y421 112 aaKnown RBP18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 ZNF451Q9Y4E5 1061 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 ATG4BQ9Y4P1 393 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 PCDHGB1Q9Y5G3 927 aa18.67■□□□□ 0.58
PCDHB11-202ENST00000624887 A0A1W2PR48 441 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 PDE9AO76083 593 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 ATE1O95260 518 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 IFNW1P05000 195 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 RHCEP18577 417 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 PCMT1P22061 227 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 NTSP30990 170 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 FMO3P31513 532 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 GPC1P35052 558 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 LIMS1P48059 325 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 PXNP49023 591 aaPredicted RBP18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 TMBIM6P55061 237 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 NUP107P57740 925 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 TP53BP2Q13625 1128 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 LAIR1Q6GTX8 287 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 PAQR7Q86WK9 346 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 LGI4Q8N135 537 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 NAA50Q9GZZ1 169 aaKnown RBP18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 SERHL2Q9H4I8 314 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 DUSP21Q9H596 190 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 APOBEC3BQ9UH17 382 aaKnown RBP18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 TPRKBQ9Y3C4 175 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 TCRBV21S2A2A0A5A6 115 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 A6NCN8 305 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 WASHC1A8K0Z3 465 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms