RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 RDH11Q8TC12 318 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 SSC4DQ8WTU2 575 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 UBLCP1Q8WVY7 318 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 RBM18Q96H35 190 aaKnown RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 PSMG3-AS1Q96PY0 264 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 CDK15Q96Q40 435 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 PRM3Q9NNZ6 103 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 SEMA4BQ9NPR2 832 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF225Q9UK10 706 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF223Q9UK11 482 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 FBXW2Q9UKT8 454 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 SLC5A6Q9Y289 635 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 ATG4BQ9Y4P1 393 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 NCOA6Q14686 2063 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 CELSR2Q9HCU4 2923 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 FREM3P0C091 2139 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 CACNA1DQ01668 2161 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 NBPF19A0A087WUL8 3843 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 EXPH5Q8NEV8 1989 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 SERTM1A2A2V5 107 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 C17orf105B2RV13 164 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 SAP18O00422 153 aaKnown RBP11.58□□□□□ -0.56
LINC00963-217ENST00000624009 TMPRSS11DO60235 418 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 FGF17O60258 216 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 NME2P1O60361 137 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 LDB3O75112 727 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 EEDO75530 441 aaKnown RBP11.58□□□□□ -0.56
LINC00963-217ENST00000624009 SUPT7LO94864 414 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 GPR75O95800 540 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 KRT6AP02538 564 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 KRT6BP04259 564 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 IGKV3-11P04433 115 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 ENO1P06733 434 aaKnown RBP11.58□□□□□ -0.56
LINC00963-217ENST00000624009 SP1P08047 785 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 STSP08842 583 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 FAM58BPP0C7Q3 252 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 NR2F6P10588 404 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 NME2P22392 152 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 KRT6CP48668 564 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 NEK2P51955 445 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 HNRNPH2P55795 449 aaKnown RBP11.58□□□□□ -0.56
LINC00963-217ENST00000624009 TRA2BP62995 288 aaKnown RBP11.58□□□□□ -0.56
LINC00963-217ENST00000624009 CSTF3Q12996 717 aaKnown RBP11.58□□□□□ -0.56
LINC00963-217ENST00000624009 MPEG1Q2M385 716 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 UNC50Q53HI1 259 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 OR52E8Q6IFG1 317 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 LETMD1Q6P1Q0 360 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 EMBQ6PCB8 327 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 CLNKQ7Z7G1 428 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 GSPT2Q8IYD1 628 aaKnown RBP11.58□□□□□ -0.56
LINC00963-217ENST00000624009 GBP7Q8N8V2 638 aaPredicted RBP11.58□□□□□ -0.56
LINC00963-217ENST00000624009 OR5L2Q8NGL0 311 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 NUBPLQ8TB37 319 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 PRR7Q8TB68 274 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 THAP3Q8WTV1 239 aaPredicted RBP11.58□□□□□ -0.56
LINC00963-217ENST00000624009 TMEM125Q96AQ2 219 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 FBXL20Q96IG2 436 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 SIGLEC12Q96PQ1 595 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 TMEM237Q96Q45 408 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 MYOTQ9UBF9 498 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 COPS7AQ9UBW8 275 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 TBK1Q9UHD2 729 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 GRID1Q9ULK0 1009 aa11.58□□□□□ -0.56
LINC00963-217ENST00000624009 TEX15Q9BXT5 2789 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 A0A1W2PR48 441 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 A8MUA0 341 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 MAN1A2O60476 641 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 ULK1O75385 1050 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 ITGA10O75578 1167 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 ESRRBO95718 433 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 SLC35E2P0CK97 266 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 ALOX15P16050 662 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-217ENST00000624009 GSTM5P46439 218 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 SSR4P51571 173 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 DNAJB13P59910 316 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 OC90Q02509 493 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-217ENST00000624009 FOLH1Q04609 750 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 SLC18A2Q05940 514 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 TBL3Q12788 808 aaKnown RBP11.57□□□□□ -0.56
LINC00963-217ENST00000624009 EIF2S3LQ2VIR3 472 aaKnown RBP11.57□□□□□ -0.56
LINC00963-217ENST00000624009 C4orf17Q53FE4 359 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 SPINK14Q6IE38 97 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 ZYG11AQ6WRX3 759 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 BNC2Q6ZN30 1099 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-217ENST00000624009 GPRIN3Q6ZVF9 776 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 DND1Q8IYX4 353 aaKnown RBP11.57□□□□□ -0.56
LINC00963-217ENST00000624009 RNF175Q8N4F7 328 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 TMEM156Q8N614 296 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 SLC2A12Q8TD20 617 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 ZNF721Q8TF20 911 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 SELENOMQ8WWX9 145 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 SGCZQ96LD1 299 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 DGAT2Q96PD7 388 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 SORBS1Q9BX66 1292 aaKnown RBP11.57□□□□□ -0.56
LINC00963-217ENST00000624009 SHCBP1LQ9BZQ2 653 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 ROPN1BQ9BZX4 212 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-217ENST00000624009 ROPN1Q9HAT0 212 aaPredicted RBP11.57□□□□□ -0.56
LINC00963-217ENST00000624009 MKS1Q9NXB0 559 aa11.57□□□□□ -0.56
LINC00963-217ENST00000624009 VPS29Q9UBQ0 182 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms