RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SEMG2Q02383 582 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 ZNF33BQ06732 778 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 DOC2AQ14183 400 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 ANKS3Q6ZW76 656 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 OXR1Q8N573 874 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 SLC37A3Q8NCC5 494 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 GPR26Q8NDV2 337 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 OR52I1Q8NGK6 324 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 OR8J1Q8NGP2 316 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 HUS1BQ8NHY5 278 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 LRRC20Q8TCA0 184 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 AKAP1Q92667 903 aaKnown RBP eCLIP13.45□□□□□ -0.26
LDB3-209ENST00000623056 C1GALT1C1Q96EU7 318 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 PRM3Q9NNZ6 103 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 ZDHHC3Q9NYG2 299 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 MBD1Q9UIS9 605 aaPredicted RBP13.45□□□□□ -0.26
LDB3-209ENST00000623056 DIMT1Q9UNQ2 313 aaKnown RBP13.45□□□□□ -0.26
LDB3-209ENST00000623056 MTMR11A4FU01 709 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 LINC00862A6NCI5 91 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 UGDHO60701 494 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 HPGDSO60760 199 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 VNN2O95498 520 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 GKP32189 559 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 XKP51811 444 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 PCBP3P57721 371 aaKnown RBP13.44□□□□□ -0.26
LDB3-209ENST00000623056 RAB25P57735 213 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 AP1S1P61966 158 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 IL18Q14116 193 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 HEPACAMQ14CZ8 416 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 SEC23BQ15437 767 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 ZNF630Q2M218 657 aaPredicted RBP13.44□□□□□ -0.26
LDB3-209ENST00000623056 PLK5Q496M5 336 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 TPGS1Q6ZTW0 290 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 TSPAN33Q86UF1 283 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 LAPTM4BQ86VI4 370 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 OR5AK3PQ8NH89 298 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 GOT1L1Q8NHS2 421 aaPredicted RBP13.44□□□□□ -0.26
LDB3-209ENST00000623056 AP2M1Q96CW1 435 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 TMEM43Q9BTV4 400 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 HCN2Q9UL51 889 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 PCDHB7Q9Y5E2 793 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 SLC22A5O76082 557 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 RAB36O95755 333 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 PDGFAP04085 211 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 GSTM1P09488 218 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 PUM1Q14671 1186 aaKnown RBP eCLIP13.44□□□□□ -0.26
LDB3-209ENST00000623056 SF3A2Q15428 464 aaKnown RBP13.44□□□□□ -0.26
LDB3-209ENST00000623056 OCLNQ16625 522 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 CRTC2Q53ET0 693 aaPredicted RBP13.44□□□□□ -0.26
LDB3-209ENST00000623056 TRIM40Q6P9F5 258 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 CXCL17Q6UXB2 119 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 ZNF782Q6ZMW2 699 aaPredicted RBP13.44□□□□□ -0.26
LDB3-209ENST00000623056 CELF5Q8N6W0 485 aaKnown RBP13.44□□□□□ -0.26
LDB3-209ENST00000623056 IL17RCQ8NAC3 791 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 TM9SF4Q92544 642 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 BHLHE41Q9C0J9 482 aaPredicted RBP13.44□□□□□ -0.26
LDB3-209ENST00000623056 CWH43Q9H720 699 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 SGK2Q9HBY8 427 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 GKN1Q9NS71 199 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 ABT1Q9ULW3 272 aaKnown RBP13.44□□□□□ -0.26
LDB3-209ENST00000623056 VWA8A3KMH1 1905 aa13.44□□□□□ -0.26
LDB3-209ENST00000623056 AGAP14A8MT82 685 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 INMT-MINDY4F8WBC2 141 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 GFYI3L273 518 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 PDPK1O15530 556 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 DDX5P17844 614 aaKnown RBP13.43□□□□□ -0.26
LDB3-209ENST00000623056 WEE1P30291 646 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 PER3P56645 1201 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 WDR5P61964 334 aaKnown RBP13.43□□□□□ -0.26
LDB3-209ENST00000623056 CYP4F8P98187 520 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 DSC1Q08554 894 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 CDH18Q13634 790 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 MBTPS1Q14703 1052 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 ANKRD54Q6NXT1 300 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 QSOX2Q6ZRP7 698 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 IQCF1Q8N6M8 205 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.43□□□□□ -0.26
LDB3-209ENST00000623056 TMEM163Q8TC26 289 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 CIDECQ96AQ7 238 aaPredicted RBP13.43□□□□□ -0.26
LDB3-209ENST00000623056 MTERF3Q96E29 417 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 METTL2AQ96IZ6 378 aaKnown RBP13.43□□□□□ -0.26
LDB3-209ENST00000623056 GPR137Q96N19 417 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 KCNJ15Q99712 375 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 TM9SF2Q99805 663 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 WRAP53Q9BUR4 548 aaKnown RBP13.43□□□□□ -0.26
LDB3-209ENST00000623056 RC3H2Q9HBD1 1191 aaKnown RBP13.43□□□□□ -0.26
LDB3-209ENST00000623056 TVP23BQ9NYZ1 205 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 ELF5Q9UKW6 265 aaPredicted RBP13.43□□□□□ -0.26
LDB3-209ENST00000623056 ANGPT4Q9Y264 503 aa13.43□□□□□ -0.26
LDB3-209ENST00000623056 SF3B6Q9Y3B4 125 aaKnown RBP13.43□□□□□ -0.26
LDB3-209ENST00000623056 SLC38A8A6NNN8 435 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 ISM1B1AKI9 464 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 STK25O00506 426 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 FABP7O15540 132 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 OR10H3O60404 316 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 RFPL3O75679 317 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 STC2O76061 302 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 IRF1P10914 325 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 HSD3B1P14060 373 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms