RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 RYBPQ8N488 228 aaPredicted RBP7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 KLHL36Q8N4N3 616 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 DCBLD1Q8N8Z6 715 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 TMIEQ8NEW7 156 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 TMEM41AQ96HV5 264 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 SOSTQ9BQB4 213 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 CNPPD1Q9BV87 410 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 DDX31Q9H8H2 851 aaKnown RBP7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF408Q9H9D4 720 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 ARNT2Q9HBZ2 717 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 NIT2Q9NQR4 276 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 IMPAD1Q9NX62 359 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 CNOT2Q9NZN8 540 aaKnown RBP7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 ING1Q9UK53 422 aaPredicted RBP7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 PADI2Q9Y2J8 665 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 PCDHGA6Q9Y5G7 932 aa7.18□□□□□ -1.26
TRIM49B-202ENST00000622138 TRPM7Q96QT4 1865 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 A0A1W2PQL4 384 aaPredicted RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ELOVL7A1L3X0 281 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 FAM220BPB1ANY3 271 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 TNFRSF10BO14763 440 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 SCAMP1O15126 338 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 CASC3O15234 703 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 LDB2O43679 373 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 SCG5P05408 212 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 LPLP06858 475 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 HMBSP08397 361 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 PIRTP0C851 137 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ODC1P11926 461 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 MTHFD2P13995 350 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 RAB3BP20337 219 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 SSTR2P30874 369 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 TRHRP34981 398 aaPredicted RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 GGT2P36268 569 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 CLCN7P51798 805 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 NR0B1P51843 470 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ACLYP53396 1101 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 MTPNP58546 118 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 MRPS6P82932 125 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ITKQ08881 620 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 PPP1R8Q12972 351 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 CAMK2DQ13557 499 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 SNTB1Q13884 538 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ERV3-1Q14264 604 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ATP6AP1LQ52LC2 224 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF628Q5EBL2 1059 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 OR2T5Q6IEZ7 315 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 NLRC3Q7RTR2 1065 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ATP6V1C2Q8NEY4 427 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 OR2T29Q8NH02 315 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ARRDC2Q8TBH0 407 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 PABPC5Q96DU9 382 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 MRPS24Q96EL2 167 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 TSPAN17Q96FV3 270 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 OTUB1Q96FW1 271 aaPredicted RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 NARS2Q96I59 477 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 TEX37Q96LM6 180 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 PTPN18Q99952 460 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ERVK-6Q9BXR3 956 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ARHGAP39Q9C0H5 1083 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 MFSD1Q9H3U5 465 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ANKRD19PQ9H560 264 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF768Q9H5H4 540 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 EVA1AQ9H8M9 152 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 AGO3Q9H9G7 860 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 MID1IP1Q9NPA3 183 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 EXOSC4Q9NPD3 245 aaKnown RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 SLAMF7Q9NQ25 335 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 SNTG1Q9NSN8 517 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 VNN3Q9NY84 501 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 SLAMF8Q9P0V8 285 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 MIOXQ9UGB7 285 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 UTS2RQ9UKP6 389 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF490Q9ULM2 529 aaPredicted RBP7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 NPTNQ9Y639 398 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 ARL5AQ9Y689 179 aa7.17□□□□□ -1.26
TRIM49B-202ENST00000622138 DOCK4Q8N1I0 1966 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 LOC102723532A0A0G2JNH3 316 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 D6RAR5 112 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 PPM1DO15297 605 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SLC7A4O43246 635 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 B4GALT3O60512 393 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 B3GAT3O94766 335 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 STSP08842 583 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 LINC00032P0C843 101 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 PVALBP20472 110 aaPredicted RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SLC6A1P30531 599 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 LCN1P31025 176 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 POU3F4P49335 361 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 DIO3P55073 304 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 HSD17B7P56937 341 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SPCS3P61009 180 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 RNF4P78317 190 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 CRYZQ08257 329 aaKnown RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 DUSP4Q13115 394 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 CAMK2GQ13555 558 aaPredicted RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 RNF212Q495C1 297 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 B3GNTL1Q67FW5 361 aaPredicted RBP7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 FAHD1Q6P587 224 aa7.16□□□□□ -1.26
TRIM49B-202ENST00000622138 SLC16A13Q7RTY0 426 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms