RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 LIPEQ05469 1076 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 TCTE1Q5JU00 501 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 SAMD4BQ5PRF9 694 aaKnown RBP17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 TMTC4Q5T4D3 741 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 SLC48A1Q6P1K1 146 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 SLITRK4Q8IW52 837 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 PNPT1Q8TCS8 783 aaKnown RBP17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 ZNF501Q96CX3 271 aaPredicted RBP17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 GBP5Q96PP8 586 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 KLHL4Q9C0H6 718 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 ACSL6Q9UKU0 697 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 COL27A1Q8IZC6 1860 aaPredicted RBP17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 C1orf226A1L170 272 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 DNAJA2O60884 412 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 GUCY1B2O75343 617 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 ACP1P24666 158 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 FEN1P39748 380 aaKnown RBP17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 GSK3BP49841 420 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 PCBP4P57723 403 aaKnown RBP17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 IZUMO2Q6UXV1 221 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 OR4N5Q8IXE1 308 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 HIPK4Q8NE63 616 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 CATSPER1Q8NEC5 780 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 VPS37AQ8NEZ2 397 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 OR5AK3PQ8NH89 298 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 CNRIP1Q96F85 164 aaPredicted RBP17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 THUMPD3Q9BV44 507 aaKnown RBP17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 SLC35C2Q9NQQ7 365 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 DHCR7Q9UBM7 475 aaKnown RBP17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 SCOCQ9UIL1 159 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 PHF11Q9UIL8 331 aa17.55■□□□□ 0.4
SEMA6C-210ENST00000621728 TOX3O15405 576 aaPredicted RBP17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 CHST10O43529 356 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 ANKRD34CP0C6C1 535 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 CASP9P55211 416 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 ID2Q02363 134 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 HSPB3Q12988 150 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 GRM7Q14831 915 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 NDUFA9Q16795 377 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 TTLL10Q6ZVT0 673 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 TTC29Q8NA56 475 aaPredicted RBP17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 PYDC1Q8WXC3 89 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 MMABQ96EY8 250 aaPredicted RBP17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 CXorf36Q9H7Y0 433 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 LYRM4Q9HD34 91 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 CUTCQ9NTM9 273 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 EHD3Q9NZN3 535 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 HCN4Q9Y3Q4 1203 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 MAU2Q9Y6X3 613 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 MUC6Q6W4X9 2439 aa17.54■□□□□ 0.4
SEMA6C-210ENST00000621728 CYR61O00622 381 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 TGM1P22735 817 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 BUD31P41223 144 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 CDK9P50750 372 aaKnown RBP17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 CLCN2P51788 898 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 ITGA1P56199 1179 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 CLDN6P56747 220 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 SPIDRQ14159 915 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 OR8J3Q8NGG0 315 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 OR10A6Q8NH74 314 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 GATA6Q92908 595 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 BTBD9Q96Q07 612 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 GLIPR2Q9H4G4 154 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 RPF2Q9H7B2 306 aaKnown RBP17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 TAS2R7Q9NYW3 318 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 EGFL7Q9UHF1 273 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 ZNF749O43361 778 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 CBFA2T3O75081 653 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 BCAS2O75934 225 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 NTRK1P04629 796 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 SOAT1P35610 550 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 FRKP42685 505 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 PDX1P52945 283 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 MANFP55145 182 aaKnown RBP17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 OR4D2P58180 307 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 ERV3-1Q14264 604 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 C16orf72Q14CZ0 275 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 CSRP2Q16527 193 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 AASDHQ4L235 1098 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 KBTBD2Q8IY47 623 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 DNAJB8Q8NHS0 232 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 ZNF764Q96H86 408 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 AMDHD1Q96NU7 426 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 OR6C1Q96RD1 312 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 BBS4Q96RK4 519 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 ALG2Q9H553 416 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 OCIAD1Q9NX40 245 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 TAS2R9Q9NYW1 312 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 NDOR1Q9UHB4 597 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 VPS4AQ9UN37 437 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 CLCA2Q9UQC9 943 aa17.53■□□□□ 0.4
SEMA6C-210ENST00000621728 FER1L5A0AVI2 2057 aa17.52■□□□□ 0.4
SEMA6C-210ENST00000621728 C15orf38-AP3S2A0A0A6YYH1 394 aa17.52■□□□□ 0.4
SEMA6C-210ENST00000621728 CLIC1O00299 241 aa17.52■□□□□ 0.4
SEMA6C-210ENST00000621728 ACOT8O14734 319 aa17.52■□□□□ 0.4
SEMA6C-210ENST00000621728 LDB3O75112 727 aa17.52■□□□□ 0.4
SEMA6C-210ENST00000621728 TIAF1O95411 115 aa17.52■□□□□ 0.4
SEMA6C-210ENST00000621728 NSA2O95478 260 aaKnown RBP17.52■□□□□ 0.4
SEMA6C-210ENST00000621728 ALAS2P22557 587 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms