RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MAFKO60675 156 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 POP7O75817 140 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 HRGP04196 525 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 SCG5P05408 212 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 CD1DP15813 335 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 APEX1P27695 318 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 SLC6A1P30531 599 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 DNAJA1P31689 397 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 GRK4P32298 578 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 CRYBB1P53674 252 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 RPL6Q02878 288 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 CRYZQ08257 329 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 OR4D1Q15615 310 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 EIF2S3LQ2VIR3 472 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 SPOUT1Q5T280 376 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 FAHD1Q6P587 224 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 SCIMPQ6UWF3 145 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 GCNT7Q6ZNI0 430 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 KANSL1Q7Z3B3 1105 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 CHTF18Q8WVB6 975 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 PYURFQ96I23 114 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 SMOQ99835 787 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 PAAF1Q9BRP4 392 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ARHGAP39Q9C0H5 1083 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ANKRD19PQ9H560 264 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ARNT2Q9HBZ2 717 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 MARK1Q9P0L2 795 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 MARCH4Q9P2E8 410 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 ING1Q9UK53 422 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 RALGAPA2Q2PPJ7 1873 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 AGRPO00253 132 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 LZTS3O60299 673 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 SNAPC5O75971 98 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 SOX30O94993 753 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 S1PR4O95977 384 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 HAPLN1P10915 354 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 KCNE1P15382 129 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 TRHRP34981 398 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 GPX4P36969 197 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 NNMTP40261 264 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 EIF2S3P41091 472 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 CRYBB2P43320 205 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 HSPA7P48741 367 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 PGDP52209 483 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 RIDAP52758 137 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 HSD17B7P56937 341 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 CDC42EP1Q00587 391 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 XKR4Q5GH76 650 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 OR2T5Q6IEZ7 315 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 TRMT11Q7Z4G4 463 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 TAC4Q86UU9 113 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 KLHL36Q8N4N3 616 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 OR2T29Q8NH02 315 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 GLYATL2Q8WU03 294 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 SFXN2Q96NB2 322 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 OR2M2Q96R28 347 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 SARGQ9BW04 601 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ANKRA2Q9H9E1 313 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 HHATLQ9HCP6 504 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 EXOSC4Q9NPD3 245 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 TMEM30AQ9NV96 361 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 IKZF3Q9UKT9 509 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 COLQQ9Y215 455 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 PCDHGA2Q9Y5H1 932 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ZNF236Q9UL36 1845 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 HYKKA2RU49 373 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 GTPBP1O00178 669 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 IFRD1O00458 451 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 CASC3O15234 703 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 WISP3O95389 354 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 GGT2P36268 569 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ARSDP51689 593 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 DSC2Q02487 901 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ITKQ08881 620 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 CAMK2GQ13555 558 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 MED22Q15528 200 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 CHRNA6Q15825 494 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ATP6AP1LQ52LC2 224 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 PLA1AQ53H76 456 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 GDF6Q6KF10 455 aaPredicted RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 TRIM69Q86WT6 500 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 ZDHHC21Q8IVQ6 265 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 SCRN2Q96FV2 425 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 DDX31Q9H8H2 851 aaKnown RBP9.91□□□□□ -0.82
VPS11-207ENST00000620429 AMBNQ9NP70 447 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 CRTAC1Q9NQ79 661 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 DLL4Q9NR61 685 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 IMPAD1Q9NX62 359 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 BTNL2Q9UIR0 455 aa9.91□□□□□ -0.82
VPS11-207ENST00000620429 MICAL3Q7RTP6 2002 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 SUPT3HB4E1H0 165 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 D6RAR5 112 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 CREG1O75629 220 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 MTHFD2P13995 350 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 RHCEP18577 417 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 CXCL3P19876 107 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 PSMA1P25786 263 aaKnown RBP9.9□□□□□ -0.82
VPS11-207ENST00000620429 ACADLP28330 430 aa9.9□□□□□ -0.82
VPS11-207ENST00000620429 INO80DQ53TQ3 878 aaPredicted RBP9.9□□□□□ -0.82
VPS11-207ENST00000620429 TOP6BLQ8N6T0 577 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms