RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 RPL9P32969 192 aaKnown RBP11.74□□□□□ -0.53
MATR3-227ENST00000618441 GINS1Q14691 196 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 SEC23BQ15437 767 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 Q5PR19 223 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 ATAT1Q5SQI0 421 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 PRAMEF13Q5VWM6 474 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 SHFQ7M4L6 423 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 GPC2Q8N158 579 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 KRT78Q8N1N4 520 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 OR52N1Q8NH53 320 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 TRAPPC12Q8WVT3 735 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 PDCD2LQ9BRP1 358 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 NKX6-2Q9C056 277 aaPredicted RBP11.74□□□□□ -0.53
MATR3-227ENST00000618441 TINAGQ9UJW2 476 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 GSTK1Q9Y2Q3 226 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 CFAP20Q9Y6A4 193 aaKnown RBP11.74□□□□□ -0.53
MATR3-227ENST00000618441 DLEC1Q9Y238 1755 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 A0A1B0GV90 55 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 EIF3GO75821 320 aaKnown RBP eCLIP11.74□□□□□ -0.53
MATR3-227ENST00000618441 CD3GP09693 182 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 RPS12P25398 132 aaKnown RBP11.74□□□□□ -0.53
MATR3-227ENST00000618441 DDX6P26196 483 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■■□□□ 13.3
MATR3-227ENST00000618441 SERTAD2Q14140 314 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 CCNJQ5T5M9 372 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 C1orf185Q5T7R7 199 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 KIAA1211LQ6NV74 962 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 LCLAT1Q6UWP7 414 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 NUP54Q7Z3B4 507 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 POC1BQ8TC44 478 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 CREB3L4Q8TEY5 395 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 NSMAFQ92636 917 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 C7orf50Q9BRJ6 194 aaKnown RBP11.74□□□□□ -0.53
MATR3-227ENST00000618441 JAM3Q9BX67 310 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 FZD10Q9ULW2 581 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 STUB1Q9UNE7 303 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 UBIAD1Q9Y5Z9 338 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 IRAK3Q9Y616 596 aa11.74□□□□□ -0.53
MATR3-227ENST00000618441 J3KR12 359 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 SIGLEC6O43699 453 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 HTR3BO95264 441 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 LALBAP00709 142 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 C1QCP02747 245 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 ESR1P03372 595 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 OR56A5P0C7T3 313 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 C4BPBP20851 252 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 AKAP5P24588 427 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 STARP49675 285 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 ARSDP51689 593 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 TLE2Q04725 743 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 TCTE1Q5JU00 501 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 USP45Q70EL2 814 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 PDZD9Q8IXQ8 264 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 ATAD1Q8NBU5 361 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 SERINC2Q96SA4 455 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 RTP3Q9BQQ7 232 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 YIPF4Q9BSR8 244 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 SLC19A3Q9BZV2 496 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 TGIF2Q9GZN2 237 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 WNT5BQ9H1J7 359 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 EVA1AQ9H8M9 152 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 HHATLQ9HCP6 504 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 NT5MQ9NPB1 228 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 TMEM200CA6NKL6 621 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 E9PI62 339 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 ADRA1BP35368 520 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 RBBP4Q09028 425 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 ALKBH1Q13686 389 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 DDX39BQ13838 428 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 TFAP2EQ6VUC0 442 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 RAB11FIP2Q7L804 512 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 SSX9Q7RTT3 188 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 TRMT11Q7Z4G4 463 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 RASGRP3Q8IV61 690 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 SFT2D1Q8WV19 159 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 MAP3K3Q99759 626 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 CACNG6Q9BXT2 260 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 NXF3Q9H4D5 531 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 HEXA-AS1Q9H8Q6 139 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 MED16Q9Y2X0 877 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 COL1A2P08123 1366 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 ANXA9O76027 345 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 KLHL18O94889 574 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 SELLP14151 372 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 GGT2P36268 569 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 TKTL1P51854 596 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 AGFG1P52594 562 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 ARFIP1P53367 373 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 CLDN8P56748 225 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 BAMBIQ13145 260 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 SF3A2Q15428 464 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 USF2Q15853 346 aaPredicted RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 KLHL26Q53HC5 615 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 CXorf57Q6NSI4 855 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 LIX1LQ8IVB5 337 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 TRPV1Q8NER1 839 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 ZDHHC1Q8WTX9 485 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 LPPQ93052 612 aa11.73□□□□□ -0.53
MATR3-227ENST00000618441 ZC3H10Q96K80 434 aaKnown RBP11.73□□□□□ -0.53
MATR3-227ENST00000618441 NIPSNAP1Q9BPW8 284 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms