RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 FRG2Q64ET8 278 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 CXorf57Q6NSI4 855 aaKnown RBP12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 ERICH5Q6P6B1 374 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 NCEH1Q6PIU2 408 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 ZNF852Q6ZMS4 543 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 FRG2BQ96QU4 278 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 NELL2Q99435 816 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 P2RY13Q9BPV8 354 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 DOHHQ9BU89 302 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 CHIAQ9BZP6 476 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 SLC32A1Q9H598 525 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 RBFOX1Q9NWB1 397 aaKnown RBP12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 ATP6V1HQ9UI12 483 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 LOC285556D6RIA3 1793 aa12.8□□□□□ -0.36
PCDHA11-202ENST00000616325 A0A1W2PRG6 482 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 POM121CA8CG34 1229 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 YY2O15391 372 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 TLX2O43763 284 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 OR10H3O60404 316 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 CD160O95971 181 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 PER3P56645 1201 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 RPS26P62854 115 aaKnown RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 MEX3DQ86XN8 651 aaKnown RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 ZNF366Q8N895 744 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 TMEM145Q8NBT3 493 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 KLHL6Q8WZ60 621 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 C7orf34Q96L11 122 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 TRAF4Q9BUZ4 470 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 C2orf49Q9BVC5 232 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 ZNF670-ZNF695F2Z2N8 137 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 GASTP01350 101 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 SCG5P05408 212 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 ANXA4P09525 319 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 CKBP12277 381 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 CHMP24386 653 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 ACRV1P26436 265 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 CTSOP43234 321 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 DCDC1P59894 354 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 TNK1Q13470 666 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 EIF4HQ15056 248 aaKnown RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 NCF4Q15080 339 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 BRAT1Q6PJG6 821 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 OR4A15Q8NGL6 344 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 TTC9Q92623 222 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 FBXW5Q969U6 566 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 OTUB1Q96FW1 271 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 KCTD7Q96MP8 289 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 TMED9Q9BVK6 235 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 RBCK1Q9BYM8 510 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 STOML2Q9UJZ1 356 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 ZNF840PA6NDX5 716 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 H3BNC9 293 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 TLR4O00206 839 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 HBQ1P09105 142 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 NAGAP17050 411 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 PTNP21246 168 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 GSTM5P46439 218 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 MC1RQ01726 317 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 MBTPS1Q14703 1052 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 LIPIQ6XZB0 460 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 CERS6Q6ZMG9 384 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 DEFB128Q7Z7B8 93 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 LINC01599Q8WXQ3 324 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 ART5Q96L15 291 aa12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 GTPBP2Q9BX10 602 aaKnown RBP12.79□□□□□ -0.36
PCDHA11-202ENST00000616325 ALDH1A1P00352 501 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 MRPL19P49406 292 aaKnown RBP12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 MAP2K6P52564 334 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 VSX2P58304 361 aaPredicted RBP12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 MICAQ29983 383 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 ZXDCQ2QGD7 858 aaPredicted RBP12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 GLYR1Q49A26 553 aaPredicted RBP12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 CCSMST1Q4G0I0 132 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 COX20Q5RI15 118 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 MTFR2Q6P444 385 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 OR52E4Q8NGH9 312 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 NFKBIDQ8NI38 313 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 TMEM80Q96HE8 168 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 EPYCQ99645 322 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 DUSP26Q9BV47 211 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 GABARAPL3Q9BY60 117 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 SLC28A3Q9HAS3 691 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 LHX3Q9UBR4 397 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 C2orf92A0A1B0GVN3 265 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 E7EQ34 232 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 PLATP00750 562 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 F11P03951 625 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 CHI3L1P36222 383 aaPredicted RBP12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 EPHA5P54756 1037 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 RHAGQ02094 409 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 GPR17Q13304 367 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 CRHR2Q13324 411 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 INSL4Q14641 139 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 GRM7Q14831 915 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 CPTPQ5TA50 214 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 SERPINA11Q86U17 422 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms