RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 ZSCAN1Q8NBB4 408 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 ZNF461Q8TAF7 563 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 NSMAFQ92636 917 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 MRGPRX2Q96LB1 330 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 BARD1Q99728 777 aaKnown RBP4.39□□□□□ -1.71
CHD9-221ENST00000615216 TMEM168Q9H0V1 697 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 C1orf226A1L170 272 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 SMCO3A2RU48 225 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 AGAP5A6NIR3 686 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 CNTN5O94779 1100 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 RBMXP38159 391 aaKnown RBP4.39□□□□□ -1.71
CHD9-221ENST00000615216 CDH15P55291 814 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 HSD11B2P80365 405 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 GALNT1Q10472 559 aaPredicted RBP4.39□□□□□ -1.71
CHD9-221ENST00000615216 EXOC3L2Q2M3D2 409 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 C6orf89Q6UWU4 347 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 CARM1Q86X55 608 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 OR4E2Q8NGC2 313 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 PLEKHO2Q8TD55 490 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 IRF7Q92985 503 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 POTEKPQ9BYX7 375 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 PELI2Q9HAT8 420 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 RBPJLQ9UBG7 517 aa4.39□□□□□ -1.71
CHD9-221ENST00000615216 ZFR2Q9UPR6 939 aaKnown RBP4.39□□□□□ -1.71
CHD9-221ENST00000615216 ZNF701M0R085 212 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 HNRNPA1P09651 372 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD9-221ENST00000615216 KCNQ1P51787 676 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TMEM115Q12893 351 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 PMS2P3Q13401 168 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 RAB11BQ15907 218 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 C6orf136Q5SQH8 315 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 BCL2L15Q5TBC7 163 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 GTF2IRD2BQ6EKJ0 949 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 LCN8Q6JVE9 175 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 UNC5DQ6UXZ4 953 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ERN2Q76MJ5 926 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 GTF2IRD2Q86UP8 949 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TMEM156Q8N614 296 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.38□□□□□ -1.712e-24■■■■■ 59.8
CHD9-221ENST00000615216 MCHR1Q99705 422 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 IRF2BPLQ9H1B7 796 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 OR10A4Q9H209 315 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SFXN1Q9H9B4 322 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ZFP57Q9NU63 452 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SH2B3Q9UQQ2 575 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 C13orf42A0A1B0GVH6 325 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ATP6V1G1O75348 118 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CLEC3AO75596 197 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 C1GALT1C1LP0DN25 315 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HOXB2P14652 356 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 FBLP22087 321 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 TRIM74Q86UV6 250 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TRIM73Q86UV7 250 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SERINC5Q86VE9 423 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PLD6Q8N2A8 252 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 Q8N402 240 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HOXB13Q92826 284 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 ESAMQ96AP7 390 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 MAELQ96JY0 434 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 TMEM74Q96NL1 305 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 MRI1Q9BV20 369 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 NPLQ9BXD5 320 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 AIG1Q9NVV5 245 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 BLACEA4D250 179 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CLCA1A8K7I4 914 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 NOTOA8MTQ0 251 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TRAPPC6AO75865 159 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SOX14O95416 240 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 IL33O95760 270 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PTTG1O95997 202 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 GALTP07902 379 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 GGT1P19440 569 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 DUSP3P51452 185 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 NUDT6P53370 316 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 DNASE1L3Q13609 305 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 LASP1Q14847 261 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 ZNF423Q2M1K9 1284 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 C2orf27AQ580R0 203 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TXNRD3NBQ6F5E7 133 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HAGHLQ6PII5 290 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 ARMCX6Q7L4S7 300 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 DENND6BQ8NEG7 585 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 DBF4BQ8NFT6 615 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CHFRQ96EP1 664 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 NELL2Q99435 816 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 FN3KQ9H479 309 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 FOLH1BQ9HBA9 442 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PRTFDC1Q9NRG1 225 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PLAGL1Q9UM63 463 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 C2orf92A0A1B0GVN3 265 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CFHP08603 1231 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HSD17B1P14061 328 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 S100PP25815 95 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 MALLQ13021 153 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 RABL3Q5HYI8 236 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 EMC10Q5UCC4 262 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TXNDC8Q6A555 127 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PRSS58Q8IYP2 241 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TCEANCQ8N8B7 351 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 NUP43Q8NFH3 380 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms