RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 MED27Q6P2C8 311 aa16.49■□□□□ 0.23
SMN2-213ENST00000614240 ZNF473Q8WTR7 871 aaKnown RBP16.49■□□□□ 0.23
SMN2-213ENST00000614240 MS4A8Q9BY19 250 aa16.49■□□□□ 0.23
SMN2-213ENST00000614240 SEMA4BQ9NPR2 832 aaPredicted RBP16.49■□□□□ 0.23
SMN2-213ENST00000614240 SMYD2Q9NRG4 433 aa16.49■□□□□ 0.23
SMN2-213ENST00000614240 Q9UFV3 132 aa16.49■□□□□ 0.23
SMN2-213ENST00000614240 PTBP2Q9UKA9 531 aaKnown RBP16.49■□□□□ 0.23
SMN2-213ENST00000614240 BOKQ9UMX3 212 aaPredicted RBP16.49■□□□□ 0.23
SMN2-213ENST00000614240 SNX24Q9Y343 169 aa16.49■□□□□ 0.23
SMN2-213ENST00000614240 HCFC1P51610 2035 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 E7ESA3 106 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 FGF17O60258 216 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 GABRA1P14867 456 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 STT3AP46977 705 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 RAP1GDS1P52306 607 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 IST1P53990 364 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 TBL3Q12788 808 aaKnown RBP16.48■□□□□ 0.23
SMN2-213ENST00000614240 SLAMF1Q13291 335 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 TBCCQ15814 346 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 ARSKQ6UWY0 536 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 LRRC70Q7Z2Q7 622 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 LIX1LQ8IVB5 337 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 BBOF1Q8ND07 529 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 NUBPLQ8TB37 319 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 PPWD1Q96BP3 646 aaKnown RBP16.48■□□□□ 0.23
SMN2-213ENST00000614240 CMTM7Q96FZ5 175 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 ART5Q96L15 291 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 JSRP1Q96MG2 331 aaPredicted RBP16.48■□□□□ 0.23
SMN2-213ENST00000614240 MCMBPQ9BTE3 642 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 POLDIP3Q9BY77 421 aaKnown RBP16.48■□□□□ 0.23
SMN2-213ENST00000614240 CD244Q9BZW8 370 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMN2-213ENST00000614240 SPG11Q96JI7 2443 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 CELSR1Q9NYQ6 3014 aa16.48■□□□□ 0.23
SMN2-213ENST00000614240 CSMD2Q7Z408 3487 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 WISP3O95389 354 aaPredicted RBP16.47■□□□□ 0.23
SMN2-213ENST00000614240 CD99P14209 185 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 SERPINB1P30740 379 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 SSTR1P30872 391 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 TLX1P31314 330 aaPredicted RBP16.47■□□□□ 0.23
SMN2-213ENST00000614240 ADH7P40394 386 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 PAFAH1B1P43034 410 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 DLX5P56178 289 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 PLIN5Q00G26 463 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 FOLH1Q04609 750 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 DDX39BQ13838 428 aaKnown RBP16.47■□□□□ 0.23
SMN2-213ENST00000614240 ZNF791Q3KP31 576 aaPredicted RBP16.47■□□□□ 0.23
SMN2-213ENST00000614240 PRAMEF20Q5VT98 475 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 KHDRBS2Q5VWX1 349 aaKnown RBP16.47■□□□□ 0.23
SMN2-213ENST00000614240 OR4C11Q6IEV9 310 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 CREG2Q8IUH2 290 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 ZZZ3Q8IYH5 903 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 LIX1Q8N485 282 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 SLC15A4Q8N697 577 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 PDPRQ8NCN5 879 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 FAM13CQ8NE31 585 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 STAG3L4Q8TBR4 150 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 SPACA9Q96E40 222 aaPredicted RBP16.47■□□□□ 0.23
SMN2-213ENST00000614240 GAL3ST4Q96RP7 486 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 CPNE1Q99829 537 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 CENPKQ9BS16 269 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 OR51B5Q9H339 312 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 RPF2Q9H7B2 306 aaKnown RBP16.47■□□□□ 0.23
SMN2-213ENST00000614240 SAYSD1Q9NPB0 183 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 MS4A12Q9NXJ0 267 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 L3MBTL1Q9Y468 752 aa16.47■□□□□ 0.23
SMN2-213ENST00000614240 DNAJC13O75165 2243 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 IQANK1A0A1B0GTG1 560 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 CXorf49A8MYA2 514 aaPredicted RBP16.46■□□□□ 0.23
SMN2-213ENST00000614240 SUPT3HB4E1H0 165 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 CCDC188H7C350 402 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 SUPT3HO75486 399 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 EPORP19235 508 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 CASP2P42575 452 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 KIR2DL3P43628 341 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 RPL21P46778 160 aaKnown RBP16.46■□□□□ 0.23
SMN2-213ENST00000614240 RAB10P61026 200 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 BIKQ13323 160 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 SNTB1Q13884 538 aaKnown RBP16.46■□□□□ 0.23
SMN2-213ENST00000614240 RIPPLY2Q5TAB7 128 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 RAPH1Q70E73 1250 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 GPR180Q86V85 440 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 MYLK4Q86YV6 388 aaPredicted RBP16.46■□□□□ 0.23
SMN2-213ENST00000614240 CTAGE3PQ8IX95 158 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 C9orf40Q8IXQ3 194 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 CHDHQ8NE62 594 aaPredicted RBP16.46■□□□□ 0.23
SMN2-213ENST00000614240 DOK4Q8TEW6 326 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 TANKQ92844 425 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 RGMAQ96B86 450 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 GPR22Q99680 433 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 RBBP8Q99708 897 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 SORBS1Q9BX66 1292 aaKnown RBP16.46■□□□□ 0.23
SMN2-213ENST00000614240 ALG9Q9H6U8 611 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 ZFP64Q9NPA5 681 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 SPRR3Q9UBC9 169 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 OPTCQ9UBM4 332 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 B4GALT7Q9UBV7 327 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 PHF11Q9UIL8 331 aa16.46■□□□□ 0.23
SMN2-213ENST00000614240 PHF3Q92576 2039 aaKnown RBP16.46■□□□□ 0.23
SMN2-213ENST00000614240 HSPB2A8KAH6 182 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms