RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 STX16O14662 325 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 PRRG2O14669 202 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 OR6B1O95007 311 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 CLDN9O95484 217 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 COL6A2P12110 1019 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 AGAP20933 346 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 ECHS1P30084 290 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 SOX3P41225 446 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 GPR85P60893 370 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 ADORA2A-AS1P86434 159 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 SP5Q6BEB4 398 aaPredicted RBP21.09■□□□□ 0.97
FAM228B-208ENST00000613899 IL20RBQ6UXL0 311 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 ZNF321PQ8N8H1 164 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 WDR20Q8TBZ3 569 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 ZNF721Q8TF20 911 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 ATP6V1E2Q96A05 226 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 MARVELD3Q96A59 401 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 RBM18Q96H35 190 aaKnown RBP21.09■□□□□ 0.97
FAM228B-208ENST00000613899 SCYL1Q96KG9 808 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 XPR1Q9UBH6 696 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 PPT2Q9UMR5 302 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 RNF11Q9Y3C5 154 aa21.09■□□□□ 0.97
FAM228B-208ENST00000613899 A0A087WUV0 522 aaPredicted RBP21.08■□□□□ 0.97
FAM228B-208ENST00000613899 ARHGAP10A1A4S6 786 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 KIF2AO00139 706 aaPredicted RBP21.08■□□□□ 0.97
FAM228B-208ENST00000613899 HS6ST1O60243 411 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 SMIM24O75264 130 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 ETHE1O95571 254 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 PTGER1P34995 402 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 RFC3P40938 356 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 CCNG1P51959 295 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 HNRNPH2P55795 449 aaKnown RBP21.08■□□□□ 0.97
FAM228B-208ENST00000613899 FOLH1Q04609 750 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 CYP20A1Q6UW02 462 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 NUDT13Q86X67 352 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 TICAM1Q8IUC6 712 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 CHERPQ8IWX8 916 aaKnown RBP21.08■□□□□ 0.97
FAM228B-208ENST00000613899 OR4N5Q8IXE1 308 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 AGAP11Q8TF27 550 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 PHF21BQ96EK2 531 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 PELOQ9BRX2 385 aaKnown RBP21.08■□□□□ 0.97
FAM228B-208ENST00000613899 ZNF717Q9BY31 904 aaPredicted RBP21.08■□□□□ 0.97
FAM228B-208ENST00000613899 RUBCNLQ9H714 662 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 NOL11Q9H8H0 719 aaKnown RBP21.08■□□□□ 0.97
FAM228B-208ENST00000613899 WDR41Q9HAD4 459 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 CHST11Q9NPF2 352 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 ZNF358Q9NW07 568 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 ATG4BQ9Y4P1 393 aa21.08■□□□□ 0.97
FAM228B-208ENST00000613899 A0A0A6YYD5 115 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 POC1B-GALNT4F8VUJ3 575 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 ACOT7O00154 380 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 SEMA3DO95025 777 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 NR2F6P10588 404 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 ALOX15P16050 662 aaPredicted RBP21.07■□□□□ 0.96
FAM228B-208ENST00000613899 C10orf62Q5T681 223 aaPredicted RBP21.07■□□□□ 0.96
FAM228B-208ENST00000613899 C18orf63Q68DL7 685 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 MRM1Q6IN84 353 aaKnown RBP21.07■□□□□ 0.96
FAM228B-208ENST00000613899 OPN5Q6U736 354 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 RTL4Q6ZR62 310 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 ST13P4Q8IZP2 240 aaPredicted RBP21.07■□□□□ 0.96
FAM228B-208ENST00000613899 GOLM1Q8NBJ4 401 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 NUBPLQ8TB37 319 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 SERPINI1Q99574 410 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 NTMT1Q9BV86 223 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 DDX31Q9H8H2 851 aaKnown RBP21.07■□□□□ 0.96
FAM228B-208ENST00000613899 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.07■□□□□ 0.96
FAM228B-208ENST00000613899 PCTPQ9UKL6 214 aa21.07■□□□□ 0.96
FAM228B-208ENST00000613899 TRIM49D1C9J1S8 452 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 E9PLN8 166 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 OR7A17O14581 309 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 PROM1O43490 865 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 CDC40O60508 579 aaKnown RBP eCLIP21.06■□□□□ 0.96
FAM228B-208ENST00000613899 EEDO75530 441 aaKnown RBP21.06■□□□□ 0.96
FAM228B-208ENST00000613899 HTR1EP28566 365 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 PTGS2P35354 604 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 BSGP35613 385 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 ZNF630Q2M218 657 aaPredicted RBP21.06■□□□□ 0.96
FAM228B-208ENST00000613899 MPEG1Q2M385 716 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 CMPK2Q5EBM0 449 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 GK5Q6ZS86 529 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 DOLPP1Q86YN1 238 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 OR2M7Q8NG81 312 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 OR52B6Q8NGF0 335 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 PHF10Q8WUB8 498 aaKnown RBP21.06■□□□□ 0.96
FAM228B-208ENST00000613899 DCAKDQ8WVC6 231 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 SREK1Q8WXA9 508 aaKnown RBP21.06■□□□□ 0.96
FAM228B-208ENST00000613899 SENP5Q96HI0 755 aaPredicted RBP21.06■□□□□ 0.96
FAM228B-208ENST00000613899 FBXL20Q96IG2 436 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 SGCZQ96LD1 299 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 CDK15Q96Q40 435 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 VKORC1Q9BQB6 163 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 MRPL57Q9BQC6 102 aaKnown RBP21.06■□□□□ 0.96
FAM228B-208ENST00000613899 MRPL46Q9H2W6 279 aaKnown RBP21.06■□□□□ 0.96
FAM228B-208ENST00000613899 DEPPQ9NTK1 212 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 ASB4Q9Y574 426 aa21.06■□□□□ 0.96
FAM228B-208ENST00000613899 TMPRSS11DO60235 418 aa21.05■□□□□ 0.96
FAM228B-208ENST00000613899 PRKRAO75569 313 aaKnown RBP21.05■□□□□ 0.96
FAM228B-208ENST00000613899 IGKV3-11P04433 115 aa21.05■□□□□ 0.96
FAM228B-208ENST00000613899 FAM58BPP0C7Q3 252 aa21.05■□□□□ 0.96
FAM228B-208ENST00000613899 NEK2P51955 445 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms