RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 DNASE1L3Q13609 305 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 SERTAD2Q14140 314 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 UGT8Q16880 541 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 PGS1Q32NB8 556 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 PAOXQ6QHF9 649 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 SHISA6Q6ZSJ9 500 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 CAMKMTQ7Z624 323 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 PLPP5Q8NEB5 264 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 OR2Y1Q8NGV0 311 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 METTL21AQ8WXB1 218 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 UCN3Q969E3 161 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 EXOSC8Q96B26 276 aaKnown RBP13.82□□□□□ -0.2
CD48-203ENST00000613788 KLHL29Q96CT2 875 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 COQ8BQ96D53 544 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 TEX37Q96LM6 180 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 LRRC37BQ96QE4 947 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 CRB3Q9BUF7 120 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 EFHD1Q9BUP0 239 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 VN1R1Q9GZP7 353 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 SLC35C2Q9NQQ7 365 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 CCDC167Q9P0B6 97 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 WDFY3Q8IZQ1 3526 aa13.82□□□□□ -0.2
CD48-203ENST00000613788 LOC101059948A0A1B0GTJ6 334 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 WASHC1A8K0Z3 465 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 IDSB3KWA1 339 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 PCDH17O14917 1159 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 LDB3O75112 727 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 CNOT3O75175 753 aaKnown RBP13.81□□□□□ -0.2
CD48-203ENST00000613788 KLF7O75840 302 aaPredicted RBP13.81□□□□□ -0.2
CD48-203ENST00000613788 IGHEP01854 428 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 IL6P05231 212 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 PTPN4P29074 926 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 FOLR3P41439 243 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 XKP51811 444 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 POLR2JP52435 117 aaKnown RBP13.81□□□□□ -0.2
CD48-203ENST00000613788 RHAGQ02094 409 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 FOLH1Q04609 750 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 NSDHLQ15738 373 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 AGKQ53H12 422 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 ERMP1Q7Z2K6 904 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 SCUBE1Q8IWY4 988 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 OR7A2PQ8NGA2 310 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 OR8J2Q8NGG1 315 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 ANKRD9Q96BM1 317 aaPredicted RBP13.81□□□□□ -0.2
CD48-203ENST00000613788 BHLHE41Q9C0J9 482 aaPredicted RBP13.81□□□□□ -0.2
CD48-203ENST00000613788 GPN2Q9H9Y4 310 aaPredicted RBP13.81□□□□□ -0.2
CD48-203ENST00000613788 C5AR2Q9P296 337 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 DKK4Q9UBT3 224 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 C3orf18Q9UK00 162 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 TCFL5Q9UL49 500 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 ENTPD4Q9Y227 616 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 PCDHGA6Q9Y5G7 932 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 SDK2Q58EX2 2172 aa13.81□□□□□ -0.2
CD48-203ENST00000613788 DYTNA2CJ06 578 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 OR2W5A6NFC9 320 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 FGF17O60258 216 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 RECKO95980 971 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 CSNK2A2P19784 350 aaPredicted RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 MAOAP21397 527 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 IL12AP29459 219 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 S100A3P33764 101 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 MPIP34949 423 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 KIR3DL1P43629 444 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 KCNK10P57789 538 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 KLF10Q13118 480 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 UBAP2LQ14157 1087 aaKnown RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 TGIF1Q15583 401 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 ANKRD26P1Q6NSI1 321 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 OR4N5Q8IXE1 308 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 ZNF248Q8NDW4 579 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 VPS37AQ8NEZ2 397 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 OR9I1Q8NGQ6 314 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 RBM18Q96H35 190 aaKnown RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 BBS4Q96RK4 519 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 DUSP26Q9BV47 211 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 ALOXE3Q9BYJ1 711 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 MYLK2Q9H1R3 596 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 CCDC86Q9H6F5 360 aaKnown RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 NECTIN3Q9NQS3 549 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 SEMA3GQ9NS98 782 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 CAPN7Q9Y6W3 813 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 SPTBN4Q9H254 2564 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 TERTO14746 1132 aaKnown RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 PDPK1O15530 556 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 ALOX12BO75342 701 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 PGRP06401 933 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 LAMP1P11279 417 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 PORP16435 677 aaPredicted RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 NTSP30990 170 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 IGLV3-21P80748 117 aaPredicted RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 ID2Q02363 134 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 SSPNQ14714 243 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 MAPRE2Q15555 327 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 FAM174BQ3ZCQ3 159 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 SPANXN4Q5MJ08 99 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 ANXA8L1Q5VT79 327 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 BLOC1S3Q6QNY0 202 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 FUNDC1Q8IVP5 155 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 TSPEARQ8WU66 669 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 NACC2Q96BF6 587 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms