RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	CAPN12	Q6ZSI9	719 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	MAATS1	Q7Z4T9	603 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	CCDC91	Q7Z6B0	441 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	DND1	Q8IYX4	353 aa	Known RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	RPRML	Q8N4K4	120 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	SLC15A4	Q8N697	577 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	TMEM251	Q8N6I4	163 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	TANK	Q92844	425 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	SENP5	Q96HI0	755 aa	Predicted RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	SMC6	Q96SB8	1091 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	ATOH8	Q96SQ7	321 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	NMRAL1	Q9HBL8	299 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	PNPLA3	Q9NST1	481 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	SACM1L	Q9NTJ5	587 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	TNFRSF10D	Q9UBN6	386 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	KCNN3	Q9UGI6	736 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	PCDHGB3	Q9Y5G1	929 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	HCFC1	P51610	2035 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	PHF3	Q92576	2039 aa	Known RBP	10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	NIPBL	Q6KC79	2804 aa	eCLIP	10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	ITPR3	Q14573	2671 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	NPIPA2	E9PIF3	369 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	NPIPA3	F8WFD2	350 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	RTCA	O00442	366 aa	Known RBP	10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	DYRK3	O43781	588 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	FGF17	O60258	216 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	HCN1	O60741	890 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	WDR1	O75083	606 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	TGFB1	P01137	390 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508		P04436	131 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	GLI4	P10075	376 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	CCL3	P10147	92 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	MTHFD2	P13995	350 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	TNNI3	P19429	210 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	CPN2	P22792	545 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	SSR2	P43308	183 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	MAGEA5	P43359	124 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	CAV1	Q03135	178 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	DLG1	Q12959	904 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	SLAMF1	Q13291	335 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	NAB1	Q13506	487 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	KBTBD12	Q3ZCT8	623 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	RTL6	Q6ICC9	239 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	OR4C11	Q6IEV9	310 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	GRHL2	Q6ISB3	625 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	LYPD8	Q6UX82	237 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	FAM47E	Q6ZV65	393 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	GPR180	Q86V85	440 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	CCDC71	Q8IV32	467 aa	Predicted RBP	10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	C9orf40	Q8IXQ3	194 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	SPATA4	Q8NEY3	305 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	HUS1B	Q8NHY5	278 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	RHEBL1	Q8TAI7	183 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	PAQR8	Q8TEZ7	354 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	RGMA	Q96B86	450 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	RBM18	Q96H35	190 aa	Known RBP	10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	ART5	Q96L15	291 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	TTYH2	Q9BSA4	534 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	UCK2	Q9BZX2	261 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	ALG9	Q9H6U8	611 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	RPF2	Q9H7B2	306 aa	Known RBP	10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	IGSF5	Q9NSI5	407 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	PSD3	Q9NYI0	1048 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	OPTC	Q9UBM4	332 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	PHF11	Q9UIL8	331 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	ATG4B	Q9Y4P1	393 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	FAM215A	Q9Y5M1	114 aa		10.28	□□□□□ -0.76
CBWD1-222	ENST00000613508	MYOCOS	A0A1B0GUC4	107 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	NKX2-6	A6NCS4	301 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	SYCE1L	A8MT33	242 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	FAM47E-STBD1	D6RA91	191 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508		G3V3Y1	287 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508		H0YIV9	168 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	UBXN8	O00124	270 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	PLPP1	O14494	284 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	PROM1	O43490	865 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	RAD51C	O43502	376 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	KLK8	O60259	260 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	UGDH	O60701	494 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	NADK	O95544	446 aa	Predicted RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	LTA4H	P09960	611 aa	Known RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	FBXO45	P0C2W1	286 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	EPB42	P16452	691 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	PTX3	P26022	381 aa	Predicted RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	TLX1	P31314	330 aa	Predicted RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	GALNS	P34059	522 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	PLIN5	Q00G26	463 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	TNFRSF17	Q02223	184 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	ID2	Q02363	134 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	ASPH	Q12797	758 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	SLC10A1	Q14973	349 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	SPRED3	Q2MJR0	410 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	LIPJ	Q5W064	366 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	SLC22A10	Q63ZE4	541 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	METTL2B	Q6P1Q9	378 aa	Known RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	B3GNT6	Q6ZMB0	384 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	TBC1D1	Q86TI0	1168 aa	Predicted RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	CTAGE3P	Q8IX95	158 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms