RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 GPR68Q15743 365 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SMN1Q16637 294 aaKnown RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 BTBD16Q32M84 506 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 BCL7AQ4VC05 210 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 MPP7Q5T2T1 576 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 NKAIN2Q5VXU1 208 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF783Q6ZMS7 281 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 ADHFE1Q8IWW8 467 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 FAM9CQ8IZT9 166 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SETD9Q8NE22 299 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 OR8K5Q8NH50 307 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 RHOXF1Q8NHV9 184 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 ZDHHC1Q8WTX9 485 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 TP53INP1Q96A56 240 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 LRIG1Q96JA1 1093 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 LRRC3BQ96PB8 259 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 FCRL4Q96PJ5 515 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 FYTTD1Q96QD9 318 aaKnown RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SLC30A3Q99726 388 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 APOL4Q9BPW4 351 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 UCK2Q9BZX2 261 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 KRT84Q9NSB2 600 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SERGEFQ9UGK8 458 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SCN10AQ9Y5Y9 1956 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 BCAT2O15382 392 aaPredicted RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 PLOD3O60568 738 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 UGT2B11O75310 529 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 SEC14L2O76054 403 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 ALX3O95076 343 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 G6PDP11413 515 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 TGM1P22735 817 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 ITGB7P26010 798 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 ANXA11P50995 505 aaKnown RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 SRP54P61011 504 aaKnown RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 BIKQ13323 160 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 ERV3-1Q14264 604 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 RASGEF1AQ8N9B8 481 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF563Q8TA94 476 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 PIH1D2Q8WWB5 315 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 ROPN1LQ96C74 230 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 RSPRY1Q96DX4 576 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 SLC47A1Q96FL8 570 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 TFB2MQ9H5Q4 396 aaKnown RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 ARMC1Q9NVT9 282 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 FAM118AQ9NWS6 357 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 SLC22A2O15244 555 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF217O75362 1048 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 SNX4O95219 450 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 F10P00742 488 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 NCBP2P52298 156 aaKnown RBP eCLIP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 UFM1P61960 85 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 CAMK1Q14012 370 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 SPANXN4Q5MJ08 99 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 AGAP6Q5VW22 663 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 PLET1Q6UQ28 207 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 FAM131AQ6UXB0 335 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 NRARPQ7Z6K4 114 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 ADIPOR2Q86V24 386 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 LYSMD2Q8IV50 215 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 C19orf18Q8NEA5 215 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 PIK3C3Q8NEB9 887 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 OR2T12Q8NG77 320 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 PTCHD1Q96NR3 888 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 AGAP4Q96P64 663 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 RETREG1Q9H6L5 497 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 PRAMEF33A0A0G2JMD5 474 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 KLK3P07288 261 aaPredicted RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 IMPDH1P20839 514 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 P2RX3P56373 397 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 PPP2CBP62714 309 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 RPS26P62854 115 aaKnown RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 PPP2CAP67775 309 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 LASP1Q14847 261 aaKnown RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 CLCA4Q14CN2 919 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 NDUFA9Q16795 377 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 SOWAHCQ53LP3 525 aaPredicted RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 NLGN4XQ8N0W4 816 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 TP53I13Q8NBR0 393 aaPredicted RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 RCBTB1Q8NDN9 531 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 LKAAEAR1Q8TD35 194 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 RASSF5Q8WWW0 418 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 SLC5A11Q8WWX8 675 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 GTF2H4Q92759 462 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 KIAA1191Q96A73 305 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 PTERQ96BW5 349 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 TRMOQ9BU70 441 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 TMEM181Q9P2C4 612 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 IRAK3Q9Y616 596 aa10.36□□□□□ -0.75
FAM3A-221ENST00000612856 TDRD6O60522 2096 aaKnown RBP10.36□□□□□ -0.75
FAM3A-221ENST00000612856 OR2B3O76000 313 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 INHBBP09529 407 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 BLVRAP53004 296 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 PTSQ03393 145 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 DOC2AQ14183 400 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 QPRTQ15274 297 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 PYDC2Q56P42 97 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 GPR153Q6NV75 609 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 SLC9B2Q86UD5 537 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 IL17RCQ8NAC3 791 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF740Q8NDX6 193 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms