RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TGM1P22735 817 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 ACADLP28330 430 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 CTSKP43235 329 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 MRPS21P82921 87 aaKnown RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3GQ6DHY5 549 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3CQ6IPX1 549 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3Q8IZP1 549 aaPredicted RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 RPLP0P6Q8NHW5 317 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 PROX1Q92786 737 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 SIPA1Q96FS4 1042 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 PHF7Q9BWX1 381 aaPredicted RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 DCSTAMPQ9H295 470 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 MMP27Q9H306 513 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 ACER3Q9NUN7 267 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TRNAU1APQ9NX07 287 aaKnown RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 ZNF226Q9NYT6 803 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 ACSL6Q9UKU0 697 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 ZFR2Q9UPR6 939 aaKnown RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 ANGPT4Q9Y264 503 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 HCN4Q9Y3Q4 1203 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 COL4A2P08572 1712 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 A0A1W2PQU0 124 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 A0A1W2PRB8 838 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 TMEM247A6NEH6 219 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 SOX1O00570 391 aaPredicted RBP13.98□□□□□ -0.17
CDH1-213ENST00000612417 PI15O43692 258 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 AIREO43918 545 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 ACADMP11310 421 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 CBLP22681 906 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 CD40LGP29965 261 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 CHI3L1P36222 383 aaPredicted RBP13.98□□□□□ -0.17
CDH1-213ENST00000612417 CLK1P49759 484 aaKnown RBP13.98□□□□□ -0.17
CDH1-213ENST00000612417 CASP9P55211 416 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 CDK3Q00526 305 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 CBX3Q13185 183 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 TIGD6Q17RP2 521 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 KIAA1324Q6UXG2 1013 aaKnown RBP13.98□□□□□ -0.17
CDH1-213ENST00000612417 SLC46A3Q7Z3Q1 461 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 ZNF547Q8IVP9 402 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 OR52J3Q8NH60 311 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 COL21A1Q96P44 957 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 ARMC7Q9H6L4 198 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 ZNF556Q9HAH1 456 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 MBNL1Q9NR56 388 aaKnown RBP13.98□□□□□ -0.17
CDH1-213ENST00000612417 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDH1-213ENST00000612417 GPR34Q9UPC5 381 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 NCKAP1Q9Y2A7 1128 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 MAP4K5Q9Y4K4 846 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 OR1A2Q9Y585 309 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 ENPP4Q9Y6X5 453 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 NINQ8N4C6 2090 aa13.98□□□□□ -0.17
CDH1-213ENST00000612417 TRIOO75962 3097 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 PRAMEF33A0A0G2JMD5 474 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 A0A1W2PPC1 479 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 SAP18O00422 153 aaKnown RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 PLRG1O43660 514 aaKnown RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 PRAMEF10O60809 474 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 RNGTTO60942 597 aaKnown RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 KLK1P06870 262 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 RHCEP18577 417 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 UQCRC2P22695 453 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 MAT2AP31153 395 aaKnown RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 GSSP48637 474 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 IDH2P48735 452 aaKnown RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 PPP5CP53041 499 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 LIMK1P53667 647 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 RPS3AP61247 264 aaKnown RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 IRF3Q14653 427 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 IRF4Q15306 451 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 CLPPQ16740 277 aaPredicted RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 SYT16Q17RD7 645 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 PRSS53Q2L4Q9 553 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 PERM1Q5SV97 790 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 LCTLQ6UWM7 567 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 USP43Q70EL4 1123 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 VN1R5Q7Z5H4 357 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 OR2L2Q8NH16 312 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 MCFD2Q8NI22 146 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 FAM3CQ92520 227 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 COX14Q96I36 57 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 LGR4Q9BXB1 951 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 TAAR2Q9P1P5 351 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 KCND3Q9UK17 655 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 METTL15A6NJ78 407 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 RECKO95980 971 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 IL3P08700 152 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 ADORA3P0DMS8 318 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 TGFBR1P36897 503 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 ADPRHP54922 357 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 MEF2AQ02078 507 aaPredicted RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 TSTA3Q13630 321 aaPredicted RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 FGL2Q14314 439 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 ZNF404Q494X3 552 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 KIAA1161Q6NSJ0 714 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 TUBA3EQ6PEY2 450 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 TMIGD1Q6UXZ0 262 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 PLEKHG7Q6ZR37 379 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 PAGE2Q7Z2X7 111 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 FAM129CQ86XR2 697 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 OR9Q2Q8NGE9 314 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms