RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SPNS1Q9H2V7 528 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 COPS7BQ9H9Q2 264 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 CPNE5Q9HCH3 593 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ARMC1Q9NVT9 282 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 IFT80Q9P2H3 777 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 IL17BQ9UHF5 180 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 TRPS1Q9UHF7 1281 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 GPN3Q9UHW5 284 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SCOCQ9UIL1 159 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 LEF1Q9UJU2 399 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 PADI2Q9Y2J8 665 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 AP4S1Q9Y587 144 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ZZEF1O43149 2961 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 ANKDD1BA6NHY2 528 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 CCDC154A6NI56 674 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 C9JVG2 144 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 SLC28A1O00337 649 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 NDUFS4O43181 175 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 PRAMEF4O60810 478 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 DNAJA2O60884 412 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 HMOX2P30519 316 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 HNF4AP41235 474 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 AVPR1BP47901 424 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 MED21Q13503 144 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 FXNQ16595 210 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 COL28A1Q2UY09 1125 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 PAGE3Q5JUK9 113 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 ARHGAP40Q5TG30 622 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 PRAMEF9Q5VWM5 478 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 MLIPQ5VWP3 458 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 LIPJQ5W064 366 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 LCN8Q6JVE9 175 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 TMEM214Q6NUQ4 689 aaKnown RBP8.35□□□□□ -1.07
SMAD4-217ENST00000611848 NIPAL1Q6NVV3 410 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 MRPL14Q6P1L8 145 aaKnown RBP8.35□□□□□ -1.07
SMAD4-217ENST00000611848 C19orf48Q6RUI8 117 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 OVCH1Q7RTY7 1134 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 ANKRD53Q8N9V6 530 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 NT5CQ8TCD5 201 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 ZDHHC16Q969W1 377 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 FKBP10Q96AY3 582 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 PPP3R2Q96LZ3 170 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 SLC29A3Q9BZD2 475 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 MUC13Q9H3R2 512 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 ACTL8Q9H568 366 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 PRORYQ9H606 182 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 ZNF304Q9HCX3 659 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 ASIC5Q9NY37 505 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 RAB26Q9ULW5 256 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 SLC22A7Q9Y694 548 aa8.35□□□□□ -1.07
SMAD4-217ENST00000611848 KMT2BQ9UMN6 2715 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-217ENST00000611848 EIF4E1BA6NMX2 242 aaKnown RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 H0YIG0 161 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 RGS14O43566 566 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 FOXS1O43638 330 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 CLEC3AO75596 197 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 CREG1O75629 220 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 MED26O95402 600 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 NSA2O95478 260 aaKnown RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 STAMBPO95630 424 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 STATHP02808 62 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 SERPIND1P05546 499 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 ZNF26P17031 533 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 WT1P19544 449 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 CD22P20273 847 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 ATP6V1B2P21281 511 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 JAK1P23458 1154 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 OR1D4P47884 311 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 HSPA13P48723 471 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 CLCN2P51788 898 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 PRSS12P56730 875 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 EEFSECP57772 596 aaKnown RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 STXBP1P61764 594 aaKnown RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 SKP1P63208 163 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 FOLH1Q04609 750 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 NFYCQ13952 458 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 CAPRIN1Q14444 709 aaKnown RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 KIAA0040Q15053 153 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 NR6A1Q15406 480 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 AP5B1Q2VPB7 878 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 RFTN2Q52LD8 501 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 GRHL2Q6ISB3 625 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 MED27Q6P2C8 311 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 CYP20A1Q6UW02 462 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 ABHD13Q7L211 337 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 GPR155Q7Z3F1 870 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 PTRH1Q86Y79 214 aaKnown RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 LAS2Q8IYD9 372 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 MARVELD2Q8N4S9 558 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 METTL27Q8N6F8 245 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 KCT2Q8NC54 265 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 CREB3L4Q8TEY5 395 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 COL26A1Q96A83 441 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 VPS33AQ96AX1 596 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 MMABQ96EY8 250 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 MAGEB10Q96LZ2 347 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-217ENST00000611848 C1orf50Q9BV19 199 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 TRIM15Q9C019 465 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 SLC6A16Q9GZN6 736 aa8.34□□□□□ -1.07
SMAD4-217ENST00000611848 SLC26A1Q9H2B4 701 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms