RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 MICAQ29983 383 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 TOR1AIP1Q5JTV8 583 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 GTF2IRD2BQ6EKJ0 949 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 LAIR1Q6GTX8 287 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 ABHD17CQ6PCB6 329 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 Q6ZPB1 254 aaPredicted RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 GTF2IRD2Q86UP8 949 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 CCDC71Q8IV32 467 aaPredicted RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 ACOT4Q8N9L9 421 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 OR4C15Q8NGM1 316 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 ASB12Q8WXK4 309 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 BMFQ96LC9 184 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 AMDHD1Q96NU7 426 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 BBS4Q96RK4 519 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 PIP5K1AQ99755 562 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 GABARAPL3Q9BY60 117 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 TMEM168Q9H0V1 697 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 SCN3BQ9NY72 215 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 TAS2R7Q9NYW3 318 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 TPRKBQ9Y3C4 175 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 PCDHGA4Q9Y5G9 962 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 MDC1Q14676 2089 aaKnown RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 CHRM5P08912 532 aaPredicted RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 HOXC4P09017 264 aaPredicted RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 TFPTP0C1Z6 253 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 HNRNPA2B1P22626 353 aaKnown RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 NTSP30990 170 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 PTGER1P34995 402 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 TPMTP51580 245 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 NCBP2P52298 156 aaKnown RBP eCLIP12.91□□□□□ -0.34
NEK3-205ENST00000610828 RAB8AP61006 207 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 MRPS21P82921 87 aaKnown RBP12.91□□□□□ -0.34
NEK3-205ENST00000610828 TFF2Q03403 129 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 ADPRMQ3LIE5 342 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 FGD3Q5JSP0 725 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 OR2L5Q8NG80 312 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 OR9Q2Q8NGE9 314 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 NIPSNAP1Q9BPW8 284 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 SYNPO2LQ9H987 977 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 PRDM7Q9NQW5 492 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 OR6C2Q9NZP2 312 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 TMEM9Q9P0T7 183 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 RHCGQ9UBD6 479 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 FBXW2Q9UKT8 454 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 NAALAD2Q9Y3Q0 740 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 ENPP4Q9Y6X5 453 aa12.91□□□□□ -0.34
NEK3-205ENST00000610828 BTN3A3O00478 584 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 MAN2B1O00754 1011 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 PCDH17O14917 1159 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 GADD45GO95257 159 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 RASGRP1O95267 797 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 ALPPL2P10696 532 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 CDK4P11802 303 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 ANXA8P13928 327 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 JUNDP17535 347 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 CD72P21854 359 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 PCMT1P22061 227 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 FUT4P22083 530 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 ATP5A1P25705 553 aaKnown RBP12.9□□□□□ -0.34
NEK3-205ENST00000610828 CERS1P27544 350 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 TMBIM6P55061 237 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 CXCR4P61073 352 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 EMX1Q04741 257 aaPredicted RBP12.9□□□□□ -0.34
NEK3-205ENST00000610828 MLC1Q15049 377 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 NPTX1Q15818 432 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 PROX2Q3B8N5 592 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 DENND6BQ8NEG7 585 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 OR5D16Q8NGK9 328 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 PSMA8Q8TAA3 256 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 PHF10Q8WUB8 498 aaKnown RBP12.9□□□□□ -0.34
NEK3-205ENST00000610828 MSLNLQ96KJ4 702 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 HRASLS5Q96KN8 279 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 PITX2Q99697 317 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 RHNO1Q9BSD3 238 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 ZCCHC3Q9NUD5 404 aaKnown RBP12.9□□□□□ -0.34
NEK3-205ENST00000610828 ACER3Q9NUN7 267 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 EHD3Q9NZN3 535 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 ZNF624Q9P2J8 865 aaPredicted RBP12.9□□□□□ -0.34
NEK3-205ENST00000610828 ERVK-18Q9QC07 812 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 PCDHGA6Q9Y5G7 932 aa12.9□□□□□ -0.34
NEK3-205ENST00000610828 A0A1W2PR48 441 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 TCRBV21S2A2A0A5A6 115 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 TMEM247A6NEH6 219 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 PGRMC2O15173 223 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 PCDHGA12O60330 932 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 MAN1A2O60476 641 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 FAM20BO75063 409 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 INMTO95050 263 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 RECKO95980 971 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 OR12D1P0DN82 309 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 POU2F1P14859 743 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 RHCEP18577 417 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 NDUFS1P28331 727 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 PRKAG1P54619 331 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 SLC35A2P78381 396 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 KCNC4Q03721 635 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms