RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 MMACHCQ9Y4U1 282 aa17.92■□□□□ 0.46
SGMS1-208ENST00000608287 TCRBV16S1A1N1A0A5B0 115 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 A8MT66 165 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 H0YIV9 168 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 CLDN4O14493 209 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 SBK3P0C264 359 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 PYGBP11216 843 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 TAC1P20366 129 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 MSX1P28360 303 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 SSR2P43308 183 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 RAP1GDS1P52306 607 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 MYBPHQ13203 477 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 RCN2Q14257 317 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 AP5B1Q2VPB7 878 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 DEPDC1Q5TB30 811 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 ZNF793Q6ZN11 406 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 LCA5Q86VQ0 697 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 CLYBLQ8N0X4 340 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 TMEM151AQ8N4L1 468 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 L3MBTL4Q8NA19 623 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 MYRIPQ8NFW9 859 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 OR52B6Q8NGF0 335 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 M1APQ8TC57 530 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 ACMSDQ8TDX5 336 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 SCMH1Q96GD3 660 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 CENPKQ9BS16 269 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 SEMA4BQ9NPR2 832 aaPredicted RBP17.91■□□□□ 0.46
SGMS1-208ENST00000608287 PRTFDC1Q9NRG1 225 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 HCFC1P51610 2035 aa17.91■□□□□ 0.46
SGMS1-208ENST00000608287 IGKV3D-11A0A0A0MRZ8 115 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 SMIM23A6NLE4 172 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 A8MUA0 341 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 SLU7O95391 586 aaKnown RBP17.9■□□□□ 0.46
SGMS1-208ENST00000608287 ZNF24P17028 368 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 HIST1H1TP22492 207 aaPredicted RBP17.9■□□□□ 0.46
SGMS1-208ENST00000608287 ATP5A1P25705 553 aaKnown RBP17.9■□□□□ 0.46
SGMS1-208ENST00000608287 SLCO1A2P46721 670 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 HNRNPFP52597 415 aaKnown RBP17.9■□□□□ 0.46
SGMS1-208ENST00000608287 SLC26A5P58743 744 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 RPS13P62277 151 aaKnown RBP17.9■□□□□ 0.46
SGMS1-208ENST00000608287 VSNL1P62760 191 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 SLC13A2Q13183 592 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 MEP1AQ16819 746 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 ACER2Q5QJU3 275 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 RPS27LQ71UM5 84 aaKnown RBP17.9■□□□□ 0.46
SGMS1-208ENST00000608287 ACOT4Q8N9L9 421 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 MDS2Q8NDY4 140 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 TMEM52Q8NDY8 209 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 MZB1Q8WU39 189 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 RGMAQ96B86 450 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 FRMD6Q96NE9 622 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 CSF3RQ99062 836 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 TSPAN10Q9H1Z9 355 aaPredicted RBP17.9■□□□□ 0.46
SGMS1-208ENST00000608287 ZBTB26Q9HCK0 441 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 MMP25Q9NPA2 562 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 CCM2LQ9NUG4 571 aaPredicted RBP17.9■□□□□ 0.46
SGMS1-208ENST00000608287 TSC22D4Q9Y3Q8 395 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 DNHD1Q96M86 4753 aa17.9■□□□□ 0.46
SGMS1-208ENST00000608287 A0A1W2PPM1 405 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 CYR61O00622 381 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 GSTA1P08263 222 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 RPS17P08708 135 aaKnown RBP17.89■□□□□ 0.45
SGMS1-208ENST00000608287 HOXD4P09016 255 aaPredicted RBP17.89■□□□□ 0.45
SGMS1-208ENST00000608287 PTX3P26022 381 aaPredicted RBP17.89■□□□□ 0.45
SGMS1-208ENST00000608287 HSD17B7P56937 341 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 FOXD4Q12950 439 aaPredicted RBP17.89■□□□□ 0.45
SGMS1-208ENST00000608287 TUBA3CQ13748 450 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 OR1C1Q15619 314 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 FCRLBQ6BAA4 426 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 TTC19Q6DKK2 380 aaPredicted RBP17.89■□□□□ 0.45
SGMS1-208ENST00000608287 OR4C11Q6IEV9 310 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 TUBA3EQ6PEY2 450 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 CLNKQ7Z7G1 428 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 SCUBE1Q8IWY4 988 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 ZNF595Q8IYB9 648 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 BEST3Q8N1M1 668 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 LILRB4Q8NHJ6 448 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 ALPK1Q96QP1 1244 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 MAPKAP1Q9BPZ7 522 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 NTMT1Q9BV86 223 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 SORBS1Q9BX66 1292 aaKnown RBP17.89■□□□□ 0.45
SGMS1-208ENST00000608287 PPCSQ9HAB8 311 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 LYRM4Q9HD34 91 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 KLHL1Q9NR64 748 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 SPACA6W5XKT8 324 aa17.89■□□□□ 0.45
SGMS1-208ENST00000608287 SAGE2PA6NJ88 616 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 ESPNB1AK53 854 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 KRT15P19012 456 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 TSPAN8P19075 237 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 DNASE1P24855 282 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 HSD17B3P37058 310 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 NEK2P51955 445 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 CDH13P55290 713 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 LTBQ06643 244 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 TRAF3Q13114 568 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 NCCRP1Q6ZVX7 275 aaPredicted RBP17.88■□□□□ 0.45
SGMS1-208ENST00000608287 MILR1Q7Z6M3 343 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 TDRPQ86YL5 185 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 SIAH3Q8IW03 269 aa17.88■□□□□ 0.45
SGMS1-208ENST00000608287 OR4F6Q8NGB9 312 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms