RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 MMP3P08254 477 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CTXN2P0C2S0 81 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 ENGP17813 658 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 NPR2P20594 1047 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SSTR1P30872 391 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 GDNFP39905 211 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 PRKXP51817 358 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 NAPAP54920 295 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 EGR3Q06889 387 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 C2orf80Q0P641 193 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 GAB1Q13480 694 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 DGCR6Q14129 220 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 INPP5JQ15735 1006 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 TIMM50Q3ZCQ8 353 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 AKIRIN2Q53H80 203 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CERCAMQ5T4B2 595 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 ARMC12Q5T9G4 340 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 FBXW9Q5XUX1 488 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CLEC6AQ6EIG7 209 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 DENND1BQ6P3S1 775 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 LHFPL4Q7Z7J7 247 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 PIGZQ86VD9 579 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 ZBTB8OSQ8IWT0 167 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 C15orf54Q8N8G6 183 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 TMEM104Q8NE00 496 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 OR1S1Q8NH92 325 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 SLC5A5Q92911 643 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 MARS2Q96GW9 593 aaKnown RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 CCDC74BQ96LY2 380 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 PCGF1Q9BSM1 259 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 C6orf50Q9HD87 102 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 XPNPEP3Q9NQH7 507 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 FAM212BQ9NTI7 297 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 H2AFY2Q9P0M6 372 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-215ENST00000602574 NPTNQ9Y639 398 aa8.49□□□□□ -1.05
COMMD3-215ENST00000602574 AP4M1O00189 453 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 RGS10O43665 173 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 KHDRBS3O75525 346 aaKnown RBP8.48□□□□□ -1.05
COMMD3-215ENST00000602574 RPP40O75818 363 aaKnown RBP8.48□□□□□ -1.05
COMMD3-215ENST00000602574 IFNA17P01571 189 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 IFNA6P05013 189 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 CSF3P09919 207 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 OR8U8P0C7N1 319 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 PAMP19021 973 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 ACO1P21399 889 aaKnown RBP8.48□□□□□ -1.05
COMMD3-215ENST00000602574 PSMB6P28072 239 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 MAGEA6P43360 314 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 MAGEB1P43366 347 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 SLC11A2P49281 568 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 CCR4P51679 360 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 PRPS1P60891 318 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 RPS7P62081 194 aaKnown RBP8.48□□□□□ -1.05
COMMD3-215ENST00000602574 CAMK2DQ13557 499 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 MEP1AQ16819 746 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 C14orf28Q4W4Y0 310 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 C10orf120Q5SQS8 335 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 LRRC8EQ6NSJ5 796 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 GK5Q6ZS86 529 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 BHLHA15Q7RTS1 189 aaPredicted RBP8.48□□□□□ -1.05
COMMD3-215ENST00000602574 CDK20Q8IZL9 346 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 FAM156AQ8NDB6 213 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 BBS1Q8NFJ9 593 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 OR6J1Q8NGC5 347 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 OR5T3Q8NGG3 340 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 OR2T11Q8NH01 316 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 PCNPQ8WW12 178 aaKnown RBP8.48□□□□□ -1.05
COMMD3-215ENST00000602574 AP3S1Q92572 193 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 MR1Q95460 341 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 ROPN1LQ96C74 230 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF354BQ96LW1 612 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 ADAM2Q99965 735 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF577Q9BSK1 485 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 TGIF2Q9GZN2 237 aa8.48□□□□□ -1.05
COMMD3-215ENST00000602574 BAZ2AQ9UIF9 1905 aaKnown RBP8.48□□□□□ -1.05
COMMD3-215ENST00000602574 RBBP6Q7Z6E9 1792 aaKnown RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 IQCMA0A1B0GVH7 501 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 TCRBV16S1A1N1A0A5B0 115 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 DUXAA6NLW8 204 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CYB561D2O14569 222 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 IMPA2O14732 288 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 WBP4O75554 376 aaKnown RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 HPP00738 406 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 F10P00742 488 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 RCC1P18754 421 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 EFNA1P20827 205 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 DNAJA1P31689 397 aaKnown RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CTSCP53634 463 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ACTBP60709 375 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 RAC3P60763 192 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ACTA2P62736 377 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ACTG1P63261 375 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ACTG2P63267 376 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ACTC1P68032 377 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ACTA1P68133 377 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 HSD11B2P80365 405 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 DUSP8Q13202 625 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 GRB14Q14449 540 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ODF1Q14990 250 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms