RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 GALNT1Q10472 559 aaPredicted RBP15.1■□□□□ 0.01
LSM4-206ENST00000600289 ASPHQ12797 758 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 ZNF169Q14929 603 aaPredicted RBP15.1■□□□□ 0.01
LSM4-206ENST00000600289 KRT71Q3SY84 523 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 ACER2Q5QJU3 275 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 CLNKQ7Z7G1 428 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 CRLF3Q8IUI8 442 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 HOMEZQ8IX15 550 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 AMER2Q8N7J2 671 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 CCNYL1Q8N7R7 359 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 CCDC63Q8NA47 563 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 MORN4Q8NDC4 146 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 DNAJB14Q8TBM8 379 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 CPT1CQ8TCG5 803 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 VMP1Q96GC9 406 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 SMC6Q96SB8 1091 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 NPAS2Q99743 824 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 TRMOQ9BU70 441 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 MRPL1Q9BYD6 325 aaKnown RBP15.1■□□□□ 0.01
LSM4-206ENST00000600289 ALOXE3Q9BYJ1 711 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 C12orf65Q9H3J6 166 aaKnown RBP15.1■□□□□ 0.01
LSM4-206ENST00000600289 SSU72Q9NP77 194 aaKnown RBP15.1■□□□□ 0.01
LSM4-206ENST00000600289 MID1IP1Q9NPA3 183 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 SLC12A4Q9UP95 1085 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 TRAV17A0A0B4J275 112 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 A0A1W2PR48 441 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 A1L4Q6 167 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 OR5H15A6NDH6 313 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 TYROBPO43914 113 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 FGF17O60258 216 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 TRIM13O60858 407 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 LDB3O75112 727 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 WDPCPO95876 746 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 UQCRHP07919 91 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 NR2F6P10588 404 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 COL8A1P27658 744 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 DEKP35659 375 aaKnown RBP15.09■□□□□ 0.01
LSM4-206ENST00000600289 DCTP40126 519 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 STT3AP46977 705 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 CLCN2P51788 898 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 MLLT10P55197 1068 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 ARG2P78540 354 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 INPP5JQ15735 1006 aaPredicted RBP15.09■□□□□ 0.01
LSM4-206ENST00000600289 INAQ16352 499 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 TNFAIP8L3Q5GJ75 292 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 CFAP157Q5JU67 520 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 TCHHL1Q5QJ38 904 aaPredicted RBP15.09■□□□□ 0.01
LSM4-206ENST00000600289 C18orf63Q68DL7 685 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 OR52E8Q6IFG1 317 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 COMMD6Q7Z4G1 85 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 C10orf107Q8IVU9 208 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 SSC4DQ8WTU2 575 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 DAZLQ92904 295 aaKnown RBP15.09■□□□□ 0.01
LSM4-206ENST00000600289 BARD1Q99728 777 aaKnown RBP15.09■□□□□ 0.01
LSM4-206ENST00000600289 PELOQ9BRX2 385 aaKnown RBP15.09■□□□□ 0.01
LSM4-206ENST00000600289 WDR41Q9HAD4 459 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 PNO1Q9NRX1 252 aaKnown RBP15.09■□□□□ 0.01
LSM4-206ENST00000600289 SIRT5Q9NXA8 310 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 STMN3Q9NZ72 180 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 ABI3Q9P2A4 366 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 VPS29Q9UBQ0 182 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 ZNF223Q9UK11 482 aaPredicted RBP15.09■□□□□ 0.01
LSM4-206ENST00000600289 PCDHGB6Q9Y5F9 930 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 HIVEP3Q5T1R4 2406 aa15.09■□□□□ 0.01
LSM4-206ENST00000600289 CSMD2Q7Z408 3487 aa15.08■□□□□ 0.01
LSM4-206ENST00000600289 A8MUI8 341 aa15.08■□□□□ 0
LSM4-206ENST00000600289 GUCY1B2O75343 617 aa15.08■□□□□ 0
LSM4-206ENST00000600289 AIFM1O95831 613 aa15.08■□□□□ 0
LSM4-206ENST00000600289 KLK1P06870 262 aa15.08■□□□□ 0
LSM4-206ENST00000600289 GALNSP34059 522 aa15.08■□□□□ 0
LSM4-206ENST00000600289 HTR6P50406 440 aa15.08■□□□□ 0
LSM4-206ENST00000600289 TRA2BP62995 288 aaKnown RBP15.08■□□□□ 0
LSM4-206ENST00000600289 FOLH1Q04609 750 aa15.08■□□□□ 0
LSM4-206ENST00000600289 SGO1Q5FBB7 561 aa15.08■□□□□ 0
LSM4-206ENST00000600289 LRIG3Q6UXM1 1119 aa15.08■□□□□ 0
LSM4-206ENST00000600289 RNF165Q6ZSG1 346 aa15.08■□□□□ 0
LSM4-206ENST00000600289 ATCAYQ86WG3 371 aa15.08■□□□□ 0
LSM4-206ENST00000600289 RPS19BP1Q86WX3 136 aaKnown RBP15.08■□□□□ 0
LSM4-206ENST00000600289 ST13P4Q8IZP2 240 aaPredicted RBP15.08■□□□□ 0
LSM4-206ENST00000600289 BEST3Q8N1M1 668 aa15.08■□□□□ 0
LSM4-206ENST00000600289 KIF2BQ8N4N8 673 aa15.08■□□□□ 0
LSM4-206ENST00000600289 TCP10LQ8TDR4 215 aa15.08■□□□□ 0
LSM4-206ENST00000600289 PTPMT1Q8WUK0 201 aaPredicted RBP15.08■□□□□ 0
LSM4-206ENST00000600289 CHTF18Q8WVB6 975 aa15.08■□□□□ 0
LSM4-206ENST00000600289 ZIM3Q96PE6 472 aa15.08■□□□□ 0
LSM4-206ENST00000600289 FAM111AQ96PZ2 611 aa15.08■□□□□ 0
LSM4-206ENST00000600289 ACPTQ9BZG2 426 aa15.08■□□□□ 0
LSM4-206ENST00000600289 TRIM45Q9H8W5 580 aaPredicted RBP15.08■□□□□ 0
LSM4-206ENST00000600289 CLCA3PQ9Y6N3 262 aa15.08■□□□□ 0
LSM4-206ENST00000600289 APCP25054 2843 aa15.07■□□□□ 0
LSM4-206ENST00000600289 ARHGAP10A1A4S6 786 aa15.07■□□□□ 0
LSM4-206ENST00000600289 A8MUA0 341 aa15.07■□□□□ 0
LSM4-206ENST00000600289 RGS16O15492 202 aaPredicted RBP15.07■□□□□ 0
LSM4-206ENST00000600289 NPHS1O60500 1241 aa15.07■□□□□ 0
LSM4-206ENST00000600289 ERLIN1O75477 346 aa15.07■□□□□ 0
LSM4-206ENST00000600289 GPR75O95800 540 aa15.07■□□□□ 0
LSM4-206ENST00000600289 COX7A2P14406 83 aa15.07■□□□□ 0
LSM4-206ENST00000600289 TRHRP34981 398 aaPredicted RBP15.07■□□□□ 0
LSM4-206ENST00000600289 FOXA1P55317 472 aa15.07■□□□□ 0
LSM4-206ENST00000600289 MLF1P58340 268 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms