RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TPOP07202 933 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 PCNAP12004 261 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 KRT15P19012 456 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 EPORP19235 508 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 IFFO1Q0D2I5 559 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 SERTAD2Q14140 314 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 CDSNQ15517 529 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 TMEM35AQ53FP2 167 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 C16orf47Q6ZP98 133 aaPredicted RBP17.4■□□□□ 0.38
PNKP-213ENST00000599543 FGD2Q7Z6J4 655 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 ACOT4Q8N9L9 421 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 MORN4Q8NDC4 146 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 C16orf52Q8NHV5 167 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 RHEBL1Q8TAI7 183 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 FAM57AQ8TBR7 257 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 MS4A8Q9BY19 250 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 OR8D2Q9GZM6 311 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 LIN28AQ9H9Z2 209 aaKnown RBP17.4■□□□□ 0.38
PNKP-213ENST00000599543 TMEM216Q9P0N5 145 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 MYOTQ9UBF9 498 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 OPTCQ9UBM4 332 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 POLQO75417 2590 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 PDZD2O15018 2839 aa17.4■□□□□ 0.38
PNKP-213ENST00000599543 CCDC168Q8NDH2 2452 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 MYOCOSA0A1B0GUC4 107 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 SYCE1LA8MT33 242 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 C17orf105B2RV13 164 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 WWP2O00308 870 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 LDB3O75112 727 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 TNNI3P19429 210 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 ELAVL4P26378 380 aaKnown RBP17.39■□□□□ 0.37
PNKP-213ENST00000599543 SERPINB1P30740 379 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 CASP2P42575 452 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 SSR2P43308 183 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 AP5B1Q2VPB7 878 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 CMPK2Q5EBM0 449 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 MED27Q6P2C8 311 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 IL20RBQ6UXL0 311 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 ZNF793Q6ZN11 406 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 CHSY3Q70JA7 882 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 RPS27LQ71UM5 84 aaKnown RBP17.39■□□□□ 0.37
PNKP-213ENST00000599543 UBE3DQ7Z6J8 389 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 CD163Q86VB7 1156 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 PTGR2Q8N8N7 351 aaPredicted RBP17.39■□□□□ 0.37
PNKP-213ENST00000599543 ZNF473Q8WTR7 871 aaKnown RBP17.39■□□□□ 0.37
PNKP-213ENST00000599543 CA5BP1Q8WTZ4 195 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 PTPMT1Q8WUK0 201 aaPredicted RBP17.39■□□□□ 0.37
PNKP-213ENST00000599543 SREK1Q8WXA9 508 aaKnown RBP17.39■□□□□ 0.37
PNKP-213ENST00000599543 PHF21BQ96EK2 531 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 RASL10BQ96S79 203 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 DMRTA2Q96SC8 542 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 MAPKAP1Q9BPZ7 522 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 C12orf65Q9H3J6 166 aaKnown RBP17.39■□□□□ 0.37
PNKP-213ENST00000599543 COQ3Q9NZJ6 369 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 COPS7AQ9UBW8 275 aa17.39■□□□□ 0.37
PNKP-213ENST00000599543 TMEM200CA6NKL6 621 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 C19orf84I3L1E1 186 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 K7EPI3 171 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 ACOT7O00154 380 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 RTCAO00442 366 aaKnown RBP17.38■□□□□ 0.37
PNKP-213ENST00000599543 SH3BGRLO75368 114 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 OR6B1O95007 311 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 TGFB1P01137 390 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 NUDT17P0C025 328 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 SBK3P0C264 359 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 COX7A2P14406 83 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 HIST1H1TP22492 207 aaPredicted RBP17.38■□□□□ 0.37
PNKP-213ENST00000599543 ATP5A1P25705 553 aaKnown RBP17.38■□□□□ 0.37
PNKP-213ENST00000599543 SOX3P41225 446 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 PLGLB1Q02325 96 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 E2F2Q14209 437 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 SETDB1Q15047 1291 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 TSNAXIP1Q2TAA8 658 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 FAM219BQ5XKK7 198 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 ARHGAP11AQ6P4F7 1023 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 TDRPQ86YL5 185 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 LAS2Q8IYD9 372 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 C4orf33Q8N1A6 199 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 TEX9Q8N6V9 391 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 SLC2A12Q8TD20 617 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 UBTD2Q8WUN7 234 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 SDCCAG3Q96C92 435 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 CMTM7Q96FZ5 175 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 TRIM8Q9BZR9 551 aa17.38■□□□□ 0.37
PNKP-213ENST00000599543 PHF3Q92576 2039 aaKnown RBP17.37■□□□□ 0.37
PNKP-213ENST00000599543 SAP18O00422 153 aaKnown RBP17.37■□□□□ 0.37
PNKP-213ENST00000599543 ADAM10O14672 748 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 PDE9AO76083 593 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 SCELO95171 688 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 RBP1P09455 135 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 COL6A2P12110 1019 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 EPB42P16452 691 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 CPN2P22792 545 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 HK2P52789 917 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 RNF4P78317 190 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 ID2Q02363 134 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 KHDRBS2Q5VWX1 349 aaKnown RBP17.37■□□□□ 0.37
PNKP-213ENST00000599543 GRHL2Q6ISB3 625 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 MYLK4Q86YV6 388 aaPredicted RBP17.37■□□□□ 0.37
PNKP-213ENST00000599543 C7orf57Q8NEG2 295 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms