RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 TRA2AQ13595 282 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMG9-207ENST00000598860 DOC2AQ14183 400 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 SH2D4BQ5SQS7 431 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 CROCCQ5TZA2 2017 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 ZNF425Q6IV72 752 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 MED27Q6P2C8 311 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 TMEM71Q6P5X7 295 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 RNF165Q6ZSG1 346 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 ADCK2Q7Z695 626 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 SYVN1Q86TM6 617 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 MYLK4Q86YV6 388 aaPredicted RBP9.86□□□□□ -0.83
SMG9-207ENST00000598860 CLYBLQ8N0X4 340 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 OR4K1Q8NGD4 311 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 OR4D9Q8NGE8 314 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 OR52B6Q8NGF0 335 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 CHMP6Q96FZ7 201 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 SLC46A1Q96NT5 459 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 TGM7Q96PF1 710 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 CCT7Q99832 543 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 SIKE1Q9BRV8 207 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 DPH7Q9BTV6 452 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 THSD1Q9NS62 852 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 SEMA5BQ9P283 1151 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 ADAM21Q9UKJ8 722 aa9.86□□□□□ -0.83
SMG9-207ENST00000598860 SEC16AO15027 2179 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 SCN3AQ9NY46 2000 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 A0A1W2PNU3 283 aaPredicted RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 H0YIV9 168 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 UBFD1O14562 309 aaKnown RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 LYPLA1O75608 230 aaPredicted RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 TUSC2O75896 110 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 TNFSF15O95150 251 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 TGDSO95455 350 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 ZBTB11O95625 1053 aaPredicted RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 VIMP08670 466 aaKnown RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 TROVE2P10155 538 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMG9-207ENST00000598860 HSD3B1P14060 373 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 RHCEP18577 417 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 TSPAN8P19075 237 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 MAGP20916 626 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 CSF2RBP32927 897 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 AHRP35869 848 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 PDX1P52945 283 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 GFERP55789 205 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 RPS15AP62244 130 aaKnown RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 CSNK1G2P78368 415 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 RHDQ02161 417 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 ZFP36L1Q07352 338 aaKnown RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 IFT88Q13099 833 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 VMACQ2NL98 169 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 TMTC4Q5T4D3 741 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 KIAA1614Q5VZ46 1190 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 CES4AQ5XG92 561 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 TTC19Q6DKK2 380 aaPredicted RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 CYB5D1Q6P9G0 228 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 FIGLAQ6QHK4 219 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 RPS27LQ71UM5 84 aaKnown RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 RAB11FIP2Q7L804 512 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 PAQR7Q86WK9 346 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 TMEM151BQ8IW70 566 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 LAS2Q8IYD9 372 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 LINC00482Q8N8I6 264 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 METTL6Q8TCB7 284 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 ZBTB8AQ96BR9 441 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 PRR11Q96HE9 360 aaPredicted RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 ZNF317Q96PQ6 595 aaPredicted RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 TRAPPC9Q96Q05 1148 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 NRTNQ99748 197 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 MAP3K3Q99759 626 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 ZNF768Q9H5H4 540 aaKnown RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 ASCL3Q9NQ33 180 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 AKAP7Q9P0M2 348 aaPredicted RBP9.85□□□□□ -0.83
SMG9-207ENST00000598860 PDP2Q9P2J9 529 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 SH2B3Q9UQQ2 575 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 BTRCQ9Y297 605 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 FAM208BQ5VWN6 2430 aa9.85□□□□□ -0.83
SMG9-207ENST00000598860 KCNE1BA0A087WTH5 132 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 IGKV1-8A0A0C4DH67 115 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 A0A0G2JNJ9 132 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 GMNCA6NCL1 334 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 TRPC5OSA6NMA1 111 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 SHOX2O60902 331 aaPredicted RBP9.84□□□□□ -0.83
SMG9-207ENST00000598860 RASSF9O75901 435 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 KNG1P01042 644 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 CAPN1P07384 714 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 THRAP10827 490 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 CD22P20273 847 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 ARRB2P32121 409 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 PIK3CBP42338 1070 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 CCR10P46092 362 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 MGAT2Q10469 447 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 ZRSR2Q15696 482 aaKnown RBP9.84□□□□□ -0.83
SMG9-207ENST00000598860 COL28A1Q2UY09 1125 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 CACHD1Q5VU97 1274 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 NKAIN2Q5VXU1 208 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 FRG2Q64ET8 278 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 TMIGD1Q6UXZ0 262 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 FAM92BQ6ZTR7 304 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 FAM47EQ6ZV65 393 aa9.84□□□□□ -0.83
SMG9-207ENST00000598860 RNF44Q7L0R7 432 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms