RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CRIP2P52943 208 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 NAGLUP54802 743 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 CX3CL1P78423 397 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 SPIBQ01892 262 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 DMPKQ09013 629 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 BNIP1Q12981 228 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ARHGAP19Q14CB8 494 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 WDR43Q15061 677 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF789Q5FWF6 425 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 HERC4Q5GLZ8 1057 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 CFAP157Q5JU67 520 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 GRTP1Q5TC63 336 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 PDPK2PQ6A1A2 396 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 C8orf74Q6P047 294 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 TMPRSS11FQ6ZWK6 438 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ADIPOR2Q86V24 386 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 PHC2Q8IXK0 858 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 FAM9CQ8IZT9 166 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 CLYBLQ8N0X4 340 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ARFGAP2Q8N6H7 521 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF321PQ8N8H1 164 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 BANPQ8N9N5 519 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 EIF1ADQ8N9N8 165 aaKnown RBP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 NHLRC2Q8NBF2 726 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 CAMKVQ8NCB2 501 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 OR7G3Q8NG95 312 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 OR1J1Q8NGS3 322 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ST7LQ8TDW4 575 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ARHGAP45Q92619 1136 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 BCL2L2Q92843 193 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 MSANTD3Q96H12 275 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 SAMD8Q96LT4 415 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ZBTB18Q99592 522 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 EGFL8Q99944 293 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 UQCC2Q9BRT2 126 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 NSRP1Q9H0G5 558 aaKnown RBP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 TRPV6Q9H1D0 765 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 VCX3BQ9H321 246 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF696Q9H7X3 374 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 TMEM206Q9H813 350 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 NGBQ9NPG2 151 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 AGPAT5Q9NUQ2 364 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 DPP3Q9NY33 737 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 SPATA7Q9P0W8 599 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 THEGQ9P2T0 379 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 KCNJ14Q9UNX9 436 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 MRPS7Q9Y2R9 242 aaKnown RBP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 WBP11Q9Y2W2 641 aaKnown RBP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 LIPGQ9Y5X9 500 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 MYO3BQ8WXR4 1341 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 MYH14Q7Z406 1995 aaKnown RBP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 CFAP47Q6ZTR5 3102 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 TRBV2A0A0J9YWF9 115 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ZSCAN5BA6NJL1 495 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 HSBP1L1C9JCN9 74 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 NVLO15381 856 aaKnown RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 YKT6O15498 198 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 SSX5O60225 188 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 MTX2O75431 263 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF821O75541 412 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 CIB2O75838 187 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 PENKP01210 267 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 CHRNA1P02708 482 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ABHD2P08910 425 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 PRSS56P0CW18 603 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ERVK-10P10266 1014 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 EPORP19235 508 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 PTBP1P26599 531 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 PTPN4P29074 926 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 SFNP31947 248 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 NUP62P37198 522 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 PRKCIP41743 596 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 PTGER3P43115 390 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 OR1G1P47890 313 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 PDX1P52945 283 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ATP5IP56385 69 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 NME5P56597 212 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 SLC8A3P57103 927 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ST8SIA6P61647 398 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 LGALS3BPQ08380 585 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 RAPSNQ13702 412 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 IL11RAQ14626 422 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 RRS1Q15050 365 aaKnown RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 RCN1Q15293 331 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 TAF13Q15543 124 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 KIAA1644Q3SXP7 199 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ARHGEF16Q5VV41 709 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 MOB2Q70IA6 237 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 TTC5Q8N0Z6 440 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 TC2NQ8N9U0 490 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 CDKL2Q92772 493 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 PEX13Q92968 403 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 C5orf30Q96GV9 206 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 SENP5Q96HI0 755 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 IFT74Q96LB3 600 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 GDAP1L1Q96MZ0 367 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 INTS14Q96SY0 518 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 OLFM1Q99784 485 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 CCT7Q99832 543 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 BARHL1Q9BZE3 327 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms