RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 C6orf163Q5TEZ5 329 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 GPR155Q7Z3F1 870 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 ARHGAP22Q7Z5H3 698 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 NET1Q7Z628 596 aaPredicted RBP12.72□□□□□ -0.37
VMP1-217ENST00000593168 ANKRD46Q86W74 232 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 HPS6Q86YV9 775 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 MSRB3Q8IXL7 192 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 EFCAB3Q8N7B9 438 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 GOT1L1Q8NHS2 421 aaPredicted RBP12.72□□□□□ -0.37
VMP1-217ENST00000593168 N4BP2L2Q92802 583 aaPredicted RBP12.72□□□□□ -0.37
VMP1-217ENST00000593168 MIEF2Q96C03 454 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 MAPKAP1Q9BPZ7 522 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 INPP5KQ9BT40 448 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 ANKHQ9HCJ1 492 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 STARD5Q9NSY2 213 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 SLC25A37Q9NYZ2 338 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 VAPAQ9P0L0 249 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 FBXW2Q9UKT8 454 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 ATXN7L1Q9ULK2 861 aaPredicted RBP12.72□□□□□ -0.37
VMP1-217ENST00000593168 DAPP1Q9UN19 280 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 PCDHGB4Q9UN71 923 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 MRPS2Q9Y399 296 aaKnown RBP12.72□□□□□ -0.37
VMP1-217ENST00000593168 L3MBTL1Q9Y468 752 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 PCDHB14Q9Y5E9 798 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 GMEB1Q9Y692 573 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 TEX51A0A1B0GUA7 166 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 A0A1W2PRB8 838 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 PRORSD1PA6NEY8 169 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 A8MU76 341 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 H3BMH7 237 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 NME4O00746 187 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 DNAJA2O60884 412 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 PDE5AO76074 875 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 ANP32DO95626 131 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 CPSF4O95639 269 aaKnown RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 AIFM1O95831 613 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 CTSBP07858 339 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 HSD17B1P14061 328 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 ACP1P24666 158 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 TLX1P31314 330 aaPredicted RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 BUD31P41223 144 aaPredicted RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 FRKP42685 505 aaPredicted RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 CDKN2CP42773 168 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 LIM2P55344 173 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 PCBP4P57723 403 aaKnown RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 SNRPNP63162 240 aaKnown RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 TLE3Q04726 772 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 RUNX2Q13950 521 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 MLC1Q15049 377 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 MUM1Q2TAK8 710 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 FAM214AQ32MH5 1076 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 SNAP47Q5SQN1 464 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 PDSS2Q86YH6 399 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 CLECL1Q8IZS7 167 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 MMP21Q8N119 569 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 TTC29Q8NA56 475 aaPredicted RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 FGF11Q92914 225 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 DENND2DQ9H6A0 471 aaPredicted RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 ACSS1Q9NUB1 689 aaPredicted RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 SUCOQ9UBS9 1254 aaKnown RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 ZNF282Q9UDV7 671 aaPredicted RBP12.71□□□□□ -0.37
VMP1-217ENST00000593168 CES1P1Q9UKY3 287 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 PSME2Q9UL46 239 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 ERVK-11Q9UQG0 969 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 POMPQ9Y244 141 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 NAALAD2Q9Y3Q0 740 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 SPACA6W5XKT8 324 aa12.71□□□□□ -0.37
VMP1-217ENST00000593168 IGHV5-10-1A0A0J9YXX1 117 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 NTN3O00634 580 aaPredicted RBP12.7□□□□□ -0.38
VMP1-217ENST00000593168 CASC3O15234 703 aaKnown RBP12.7□□□□□ -0.38
VMP1-217ENST00000593168 NSA2O95478 260 aaKnown RBP12.7□□□□□ -0.38
VMP1-217ENST00000593168 GSNP06396 782 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 NR2F6P10588 404 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 IL1RNP18510 177 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 CPN2P22792 545 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 ACTR3P61158 418 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 CXADRP78310 365 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 TNFRSF17Q02223 184 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 RIPK1Q13546 671 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 TRIM25Q14258 630 aaKnown RBP12.7□□□□□ -0.38
VMP1-217ENST00000593168 KCNAB1Q14722 419 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 C1orf146Q5VVC0 180 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 YOD1Q5VVQ6 348 aaPredicted RBP12.7□□□□□ -0.38
VMP1-217ENST00000593168 C18orf63Q68DL7 685 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 SLC48A1Q6P1K1 146 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 TLDC1Q6P9B6 456 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 ZNF621Q6ZSS3 439 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 TMPRSS9Q7Z410 1059 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 SPACA3Q8IXA5 215 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 WDR60Q8WVS4 1066 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 OR5P2Q8WZ92 322 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 UCN3Q969E3 161 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 CIDECQ96AQ7 238 aaPredicted RBP12.7□□□□□ -0.38
VMP1-217ENST00000593168 ZBED6CLQ96FA7 236 aaPredicted RBP12.7□□□□□ -0.38
VMP1-217ENST00000593168 C10orf90Q96M02 699 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 SPRTNQ9H040 489 aaPredicted RBP12.7□□□□□ -0.38
VMP1-217ENST00000593168 SLC35C2Q9NQQ7 365 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 TAS2R9Q9NYW1 312 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.7□□□□□ -0.38
VMP1-217ENST00000593168 BCAP29Q9UHQ4 241 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms