RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 SCYL1Q96KG9 808 aa14.9□□□□□ -0.02
CIRBP-240ENST00000592815 DMRT3Q9NQL9 472 aa14.9□□□□□ -0.02
CIRBP-240ENST00000592815 ZDHHC18Q9NUE0 388 aa14.9□□□□□ -0.02
CIRBP-240ENST00000592815 MS4A12Q9NXJ0 267 aa14.9□□□□□ -0.02
CIRBP-240ENST00000592815 COPS7AQ9UBW8 275 aa14.9□□□□□ -0.02
CIRBP-240ENST00000592815 ATG4BQ9Y4P1 393 aa14.9□□□□□ -0.02
CIRBP-240ENST00000592815 PCDHGA11Q9Y5H2 935 aa14.9□□□□□ -0.02
CIRBP-240ENST00000592815 CCDC189A1A4V9 331 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 PLPP1O14494 284 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 KLHL2O95198 593 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 TLX1P31314 330 aaPredicted RBP14.89□□□□□ -0.03
CIRBP-240ENST00000592815 IGLV3-21P80748 117 aaPredicted RBP14.89□□□□□ -0.03
CIRBP-240ENST00000592815 CKAP4Q07065 602 aaKnown RBP14.89□□□□□ -0.03
CIRBP-240ENST00000592815 ASPHQ12797 758 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 BIKQ13323 160 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 GTF2H2Q13888 395 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 CPSF6Q16630 551 aaKnown RBP eCLIP14.89□□□□□ -0.03
CIRBP-240ENST00000592815 C8orf74Q6P047 294 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 GTF2H2CQ6P1K8 395 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 KLC3Q6P597 504 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 PAOXQ6QHF9 649 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 OPN5Q6U736 354 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 CEP128Q6ZU80 1094 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 DOK4Q8TEW6 326 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 TANKQ92844 425 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 GPR78Q96P69 363 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 FAM173AQ9BQD7 235 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 VPS11Q9H270 941 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 IPPKQ9H8X2 491 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 PLSCR2Q9NRY7 297 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 COQ3Q9NZJ6 369 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 CPSF2Q9P2I0 782 aaKnown RBP14.89□□□□□ -0.03
CIRBP-240ENST00000592815 PHF11Q9UIL8 331 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 RNF11Q9Y3C5 154 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 CSMD1Q96PZ7 3565 aa14.89□□□□□ -0.03
CIRBP-240ENST00000592815 NCOA6Q14686 2063 aaPredicted RBP14.88□□□□□ -0.03
CIRBP-240ENST00000592815 FBN2P35556 2912 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 WASHC1A8K0Z3 465 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 H0YIV9 168 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 ACOT7O00154 380 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 HRKO00198 91 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 PROM1O43490 865 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 DYRK3O43781 588 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 KLK8O60259 260 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 PRKRAO75569 313 aaKnown RBP14.88□□□□□ -0.03
CIRBP-240ENST00000592815 SIX3O95343 332 aaPredicted RBP14.88□□□□□ -0.03
CIRBP-240ENST00000592815 ALDOAP04075 364 aaKnown RBP14.88□□□□□ -0.03
CIRBP-240ENST00000592815 PHBP35232 272 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 SERPINB8P50452 374 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 NEK2P51955 445 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 HNRNPH2P55795 449 aaKnown RBP14.88□□□□□ -0.03
CIRBP-240ENST00000592815 PHEXP78562 749 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 FOLH1Q04609 750 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 PCBP2Q15366 365 aaKnown RBP eCLIP14.88□□□□□ -0.03
CIRBP-240ENST00000592815 MPEG1Q2M385 716 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 PIGGQ5H8A4 983 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 TMEM211Q6ICI0 200 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 DGAT2L6Q6ZPD8 337 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 RGS9BPQ6ZS82 235 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 GOLGA7Q7Z5G4 137 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 SLC22A16Q86VW1 577 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 ZNF295-AS1Q8N0V1 137 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 ZCCHC7Q8N3Z6 543 aaKnown RBP14.88□□□□□ -0.03
CIRBP-240ENST00000592815 MARVELD2Q8N4S9 558 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 REPS1Q96D71 796 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 SGCZQ96LD1 299 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 TTTY12Q9BZ98 90 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 TRIM8Q9BZR9 551 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 SACM1LQ9NTJ5 587 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 NINJ2Q9NZG7 142 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 TSC22D4Q9Y3Q8 395 aa14.88□□□□□ -0.03
CIRBP-240ENST00000592815 TNPO3Q9Y5L0 923 aaKnown RBP14.88□□□□□ -0.03
CIRBP-240ENST00000592815 GLOD5A6NK44 160 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 NPIPA2E9PIF3 369 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 NPIPA3F8WFD2 350 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 UGDHO60701 494 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 EEDO75530 441 aaKnown RBP14.87□□□□□ -0.03
CIRBP-240ENST00000592815 GLSO94925 669 aaPredicted RBP14.87□□□□□ -0.03
CIRBP-240ENST00000592815 IGKV3-11P04433 115 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 P04436 131 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 ALOX15P16050 662 aaPredicted RBP14.87□□□□□ -0.03
CIRBP-240ENST00000592815 BSGP35613 385 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 ARFIP1P53367 373 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 PLIN5Q00G26 463 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 TNFRSF17Q02223 184 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 GXYLT1Q4G148 440 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 EMC4Q5J8M3 183 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 UBAP2Q5T6F2 1119 aaKnown RBP14.87□□□□□ -0.03
CIRBP-240ENST00000592815 NDUFAF5Q5TEU4 345 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 GK5Q6ZS86 529 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 FAM47EQ6ZV65 393 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 C9orf40Q8IXQ3 194 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 GOLM1Q8NBJ4 401 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 ATP6V1E2Q96A05 226 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 LURAP1Q96LR2 239 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 TP63Q9H3D4 680 aaPredicted RBP14.87□□□□□ -0.03
CIRBP-240ENST00000592815 ACSS3Q9H6R3 686 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 ZDHHC11Q9H8X9 412 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 IL1RL2Q9HB29 575 aa14.87□□□□□ -0.03
CIRBP-240ENST00000592815 ZNF358Q9NW07 568 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms