RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 GOSR1O95249 250 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 ACSL3O95573 720 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 TBX6O95947 436 aaPredicted RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 C1QAP02745 245 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 COX7A2P14406 83 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 CD53P19397 219 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 SERPINB3P29508 390 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 MSH2P43246 934 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 AGFG1P52594 562 aaKnown RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 WNT3P56703 355 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 DCAF7P61962 342 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 ID2Q02363 134 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 DUSP8Q13202 625 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 BIKQ13323 160 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 PCBP2Q15366 365 aaKnown RBP eCLIP8.42□□□□□ -1.063e-48■■■□□ 16.7
APOC1-207ENST00000592176 PPP1R3AQ16821 1122 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 C18orf21Q32NC0 220 aaPredicted RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 ACSF3Q4G176 576 aaPredicted RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 PRAMEF20Q5VT98 475 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 CCDC137Q6PK04 289 aaKnown RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 VN1R5Q7Z5H4 357 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 GALNT7Q86SF2 657 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 PRIMA1Q86XR5 153 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 PM20D2Q8IYS1 436 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 DND1Q8IYX4 353 aaKnown RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 SPC24Q8NBT2 197 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 FAM13CQ8NE31 585 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 NUBPLQ8TB37 319 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 ANKRD9Q96BM1 317 aaPredicted RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 PPWD1Q96BP3 646 aaKnown RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 SPACA9Q96E40 222 aaPredicted RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 HSPBAP1Q96EW2 488 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 CERS2Q96G23 380 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 RBM18Q96H35 190 aaKnown RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 DGAT2Q96PD7 388 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 MAPKAP1Q9BPZ7 522 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 NAT9Q9BTE0 207 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 ZNF703Q9H7S9 590 aaPredicted RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 PROK2Q9HC23 129 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 LZTFL1Q9NQ48 299 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 ZNF490Q9ULM2 529 aaPredicted RBP8.42□□□□□ -1.06
APOC1-207ENST00000592176 OARD1Q9Y530 152 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 SPACA6W5XKT8 324 aa8.42□□□□□ -1.06
APOC1-207ENST00000592176 IQANK1A0A1B0GTG1 560 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 NPEPPSL1A6NEC2 478 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 LRRC3CA6NJW4 275 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 CLCA1A8K7I4 914 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 KIAA1324LA8MWY0 1029 aaPredicted RBP8.41□□□□□ -1.06
APOC1-207ENST00000592176 CES2O00748 559 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 CASKO14936 926 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 BANF1O75531 89 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 CPN2P22792 545 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 ATP5A1P25705 553 aaKnown RBP8.41□□□□□ -1.06
APOC1-207ENST00000592176 CTSSP25774 331 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 GDF1P27539 372 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 OPRM1P35372 400 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 RPL21P46778 160 aaKnown RBP8.41□□□□□ -1.06
APOC1-207ENST00000592176 STT3AP46977 705 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 SLC6A12P48065 614 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 KCNC1P48547 511 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 ZNF136P52737 540 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 SORDQ00796 357 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 HIST2H2ACQ16777 129 aaPredicted RBP8.41□□□□□ -1.06
APOC1-207ENST00000592176 NSUN5P2Q63ZY6 315 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 HIST2H2AA3Q6FI13 130 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 SYDE1Q6ZW31 735 aaPredicted RBP8.41□□□□□ -1.06
APOC1-207ENST00000592176 FRA10AC1Q70Z53 315 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 P3H2Q8IVL5 708 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 OR4N5Q8IXE1 308 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 C9orf40Q8IXQ3 194 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 ACOT4Q8N9L9 421 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 SRFBP1Q8NEF9 429 aaKnown RBP8.41□□□□□ -1.06
APOC1-207ENST00000592176 TRIM58Q8NG06 486 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 OR10G3Q8NGC4 313 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 RHBDF1Q96CC6 855 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 ART5Q96L15 291 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 DACH2Q96NX9 599 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 KCNC2Q96PR1 638 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 TRIB1Q96RU8 372 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 TBCDQ9BTW9 1192 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 DOHHQ9BU89 302 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 EHD1Q9H4M9 534 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 PRM3Q9NNZ6 103 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.41□□□□□ -1.06
APOC1-207ENST00000592176 GPRC5BQ9NZH0 403 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 SLC17A6Q9P2U8 582 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 CTNNAL1Q9UBT7 734 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 CNOT11Q9UKZ1 510 aaKnown RBP8.41□□□□□ -1.06
APOC1-207ENST00000592176 CAMK2AQ9UQM7 478 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 VPS13CQ709C8 3753 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 ZNF407Q9C0G0 2248 aa8.41□□□□□ -1.06
APOC1-207ENST00000592176 ANKRD33BA6NCL7 494 aa8.4□□□□□ -1.06
APOC1-207ENST00000592176 NCF1BA6NI72 391 aaPredicted RBP8.4□□□□□ -1.06
APOC1-207ENST00000592176 CD8B2A6NJW9 211 aa8.4□□□□□ -1.06
APOC1-207ENST00000592176 NCF1CA8MVU1 366 aaPredicted RBP8.4□□□□□ -1.06
APOC1-207ENST00000592176 EEF1E1-BLOC1S5C9J1V9 151 aa8.4□□□□□ -1.06
APOC1-207ENST00000592176 RTCAO00442 366 aaKnown RBP8.4□□□□□ -1.06
APOC1-207ENST00000592176 EEF1E1O43324 174 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms