RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 TSSK1BQ9BXA7 367 aa7.14□□□□□ -1.27
VMP1-213ENST00000591877 ING2Q9H160 280 aa7.14□□□□□ -1.27
VMP1-213ENST00000591877 CXorf36Q9H7Y0 433 aa7.14□□□□□ -1.27
VMP1-213ENST00000591877 G6PC2Q9NQR9 355 aa7.14□□□□□ -1.27
VMP1-213ENST00000591877 HOMER3Q9NSC5 361 aa7.14□□□□□ -1.27
VMP1-213ENST00000591877 GNPTGQ9UJJ9 305 aa7.14□□□□□ -1.27
VMP1-213ENST00000591877 PLCL2Q9UPR0 1127 aa7.14□□□□□ -1.27
VMP1-213ENST00000591877 JRKLQ9Y4A0 524 aa7.14□□□□□ -1.27
VMP1-213ENST00000591877 SHANK1Q9Y566 2161 aa7.14□□□□□ -1.27
VMP1-213ENST00000591877 USP9XQ93008 2570 aaPredicted RBP7.14□□□□□ -1.27
VMP1-213ENST00000591877 RELNP78509 3460 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 FAM237BA0A1B0GVD1 139 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 A0A1W2PS29 197 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 EFCAB8A8MWE9 144 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 H0Y3Z8 333 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 GOLGA8MH3BSY2 632 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 MASP2O00187 686 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 ZSCAN9O15535 394 aaPredicted RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 CTSVO60911 334 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 RPN2P04844 631 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 HBQ1P09105 142 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 MLNP12872 115 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 CHRM3P20309 590 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 OGNP20774 298 aaKnown RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 MCM3P25205 808 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 CNTFP26441 200 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 PSMB5P28074 263 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 GRIA3P42263 894 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 MAGEA3P43357 314 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 CCL11P51671 97 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 PRKAG1P54619 331 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 PRKAA2P54646 552 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 ADARP55265 1226 aaKnown RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 TIAL1Q01085 375 aaKnown RBP eCLIP7.13□□□□□ -1.274e-22■■■■■ 37
VMP1-213ENST00000591877 NHLH2Q02577 135 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 SRSF1Q07955 248 aaKnown RBP eCLIP7.13□□□□□ -1.27
VMP1-213ENST00000591877 KLRB1Q12918 225 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 CCNIQ14094 377 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 E2F2Q14209 437 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 FASTKQ14296 549 aaKnown RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 HLXQ14774 488 aaPredicted RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 TMED2Q15363 201 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 ANKRD20A4Q4UJ75 823 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 ACSBG2Q5FVE4 666 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 MLIPQ5VWP3 458 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 PAPD7Q5XG87 772 aaKnown RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 ZNF549Q6P9A3 640 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 CNSTQ6PJW8 725 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 CCDC137Q6PK04 289 aaKnown RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 FIGLAQ6QHK4 219 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 TMEM108Q6UXF1 575 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 OTOAQ7RTW8 1153 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 CLNKQ7Z7G1 428 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 HOOK3Q86VS8 718 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 DENND6AQ8IWF6 608 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 SLC35F6Q8N357 371 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 NAT8LQ8N9F0 302 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 OR56A1Q8NGH5 318 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 OR2A1Q8NGT9 310 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 HMGCLL1Q8TB92 370 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 MAGOHBQ96A72 148 aaKnown RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 RAD51AP1Q96B01 352 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 FAM136AQ96C01 138 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 PBKQ96KB5 322 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 ZNF285Q96NJ3 590 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 SERPINB12Q96P63 405 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 DCLRE1CQ96SD1 692 aaKnown RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 OSBPL9Q96SU4 736 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 NEU1Q99519 415 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 NUDT9Q9BW91 350 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 SYNPO2LQ9H987 977 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 RRAGDQ9NQL2 400 aaPredicted RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 TMEM160Q9NX00 188 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 EURLQ9NYK6 297 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 NDUFAF4Q9P032 175 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 NDRG4Q9ULP0 352 aaKnown RBP7.13□□□□□ -1.27
VMP1-213ENST00000591877 DAPP1Q9UN19 280 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 AP1M2Q9Y6Q5 423 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 LRRK2Q5S007 2527 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 COL12A1Q99715 3063 aa7.13□□□□□ -1.27
VMP1-213ENST00000591877 DOPEY2Q9Y3R5 2298 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 SDR42E2A6NKP2 422 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 A6NLC8 198 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 ARHGEF33A8MVX0 844 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 ZNF185O15231 689 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 PSIP1O75475 530 aaKnown RBP7.12□□□□□ -1.27
VMP1-213ENST00000591877 ONECUT2O95948 504 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 UMODP07911 640 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 ERGP11308 486 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 PKMP14618 531 aaKnown RBP7.12□□□□□ -1.27
VMP1-213ENST00000591877 HK1P19367 917 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 CAPN3P20807 821 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 ATP5DP30049 168 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 PRKAR1BP31321 381 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 MSX2P35548 267 aaPredicted RBP7.12□□□□□ -1.27
VMP1-213ENST00000591877 MLLT10P55197 1068 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 DCDP81605 110 aaKnown RBP7.12□□□□□ -1.27
VMP1-213ENST00000591877 FOXL1Q12952 345 aa7.12□□□□□ -1.27
VMP1-213ENST00000591877 DHX34Q14147 1143 aaKnown RBP7.12□□□□□ -1.27
VMP1-213ENST00000591877 CYP2A13Q16696 494 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms