RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 MTERF1Q99551 399 aaKnown RBP16.82■□□□□ 0.28
VAT1-208ENST00000590924 SERPINI1Q99574 410 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 CENPKQ9BS16 269 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 TBCDQ9BTW9 1192 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 MMP25Q9NPA2 562 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 NMRK1Q9NWW6 199 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 ENTPD4Q9Y227 616 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 OR2W5A6NFC9 320 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 A8MUI8 341 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 KLF11O14901 512 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 GALR3O60755 368 aaPredicted RBP16.81■□□□□ 0.28
VAT1-208ENST00000590924 UNC5CO95185 931 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 TGFB1P01137 390 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 ZNF888P0CJ79 500 aaPredicted RBP16.81■□□□□ 0.28
VAT1-208ENST00000590924 MST1P26927 711 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 HNRNPH1P31943 449 aaKnown RBP16.81■□□□□ 0.28
VAT1-208ENST00000590924 NEK2P51955 445 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 ABCE1P61221 599 aaKnown RBP16.81■□□□□ 0.28
VAT1-208ENST00000590924 RHAGQ02094 409 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 CSTF3Q12996 717 aaKnown RBP16.81■□□□□ 0.28
VAT1-208ENST00000590924 ABRAXAS2Q15018 415 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.81■□□□□ 0.289e-6■■■■□ 25
VAT1-208ENST00000590924 ACER2Q5QJU3 275 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 ATG16L1Q676U5 607 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 ADNP2Q6IQ32 1131 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 TRIM40Q6P9F5 258 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 ABHD17CQ6PCB6 329 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 BEST3Q8N1M1 668 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 M1APQ8TC57 530 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 MGARPQ8TDB4 240 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 SELENOMQ8WWX9 145 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 RGMAQ96B86 450 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 PEX11GQ96HA9 241 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 FAR2Q96K12 515 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 KCNC2Q96PR1 638 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 AICDAQ9GZX7 198 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 KLHL31Q9H511 634 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 KCNK13Q9HB14 408 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 LANCL2Q9NS86 450 aa16.81■□□□□ 0.28
VAT1-208ENST00000590924 ABCA12Q86UK0 2595 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 ZNF860A6NHJ4 632 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 AZIN1O14977 448 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 HNRNPRO43390 633 aaKnown RBP16.8■□□□□ 0.28
VAT1-208ENST00000590924 ERI3O43414 337 aaKnown RBP16.8■□□□□ 0.28
VAT1-208ENST00000590924 CRCPO75575 148 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 SEMA3DO95025 777 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 PDYNP01213 254 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 BGNP21810 368 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 SLC1A6P48664 564 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 RPS13P62277 151 aaKnown RBP16.8■□□□□ 0.28
VAT1-208ENST00000590924 DDX39BQ13838 428 aaKnown RBP16.8■□□□□ 0.28
VAT1-208ENST00000590924 NSDHLQ15738 373 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 MEP1AQ16819 746 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 SFT2D3Q587I9 215 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 ZNF766Q5HY98 468 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 PAPD4Q6PIY7 484 aaKnown RBP16.8■□□□□ 0.28
VAT1-208ENST00000590924 CRLF3Q8IUI8 442 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 ARFGAP2Q8N6H7 521 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 MDS2Q8NDY4 140 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 MTFMTQ96DP5 389 aaKnown RBP16.8■□□□□ 0.28
VAT1-208ENST00000590924 F2RL3Q96RI0 385 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 LPAR4Q99677 370 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 NPLQ9BXD5 320 aaPredicted RBP16.8■□□□□ 0.28
VAT1-208ENST00000590924 RBCK1Q9BYM8 510 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 MANSC1Q9H8J5 431 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 AHSPQ9NZD4 102 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 SEC14L3Q9UDX4 400 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 HAO1Q9UJM8 370 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 TRAF6Q9Y4K3 522 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 TIMM22Q9Y584 194 aa16.8■□□□□ 0.28
VAT1-208ENST00000590924 CDC123O75794 336 aaPredicted RBP16.79■□□□□ 0.28
VAT1-208ENST00000590924 HSPA4LO95757 839 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 CHEK2O96017 543 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 CHRNGP07510 517 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 FHP07954 510 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 CHN1P15882 459 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 ARRB2P32121 409 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 CA7P43166 264 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 PMP22Q01453 160 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 TUBA3CQ13748 450 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 DEFB134Q4QY38 66 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 CES4AQ5XG92 561 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 FCRLBQ6BAA4 426 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 TUBA3EQ6PEY2 450 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 TRIM46Q7Z4K8 759 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 OR5T3Q8NGG3 340 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 TSLPQ969D9 159 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 TBC1D20Q96BZ9 403 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 QRFPRQ96P65 431 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 SERINC2Q96SA4 455 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 NPAS2Q99743 824 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 CCT7Q99832 543 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 OR51B5Q9H339 312 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 PRM3Q9NNZ6 103 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 PRDM7Q9NQW5 492 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 FARSBQ9NSD9 589 aaKnown RBP16.79■□□□□ 0.28
VAT1-208ENST00000590924 INTS9Q9NV88 658 aaKnown RBP16.79■□□□□ 0.28
VAT1-208ENST00000590924 THAP1Q9NVV9 213 aa16.79■□□□□ 0.28
VAT1-208ENST00000590924 SUCOQ9UBS9 1254 aaKnown RBP16.79■□□□□ 0.28
VAT1-208ENST00000590924 RAP2CQ9Y3L5 183 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms