RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CRLF3Q8IUI8 442 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 LGI4Q8N135 537 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ARMC10Q8N2F6 343 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ZCCHC7Q8N3Z6 543 aaKnown RBP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 KIF2BQ8N4N8 673 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 CISD2Q8N5K1 135 aaKnown RBP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 APCDD1LQ8NCL9 501 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 UBLCP1Q8WVY7 318 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 RGMAQ96B86 450 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 CNDP1Q96KN2 507 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 TMEM237Q96Q45 408 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 CCDC77Q9BR77 488 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ERVK-6Q9BXR3 956 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 PPCSQ9HAB8 311 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 KCNK13Q9HB14 408 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 SEMA4BQ9NPR2 832 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ASF1BQ9NVP2 202 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 TBK1Q9UHD2 729 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 TEKT2Q9UIF3 430 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF225Q9UK10 706 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 EMCNQ9ULC0 261 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 MRPS33Q9Y291 106 aaKnown RBP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 DOPEY1Q5JWR5 2465 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 A0A0A6YYD5 115 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 TRAV17A0A0B4J275 112 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 BLACEA4D250 179 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 SYNDIG1LA6NDD5 238 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 OR5H15A6NDH6 313 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 A8MUI8 341 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 FOXO6A8MYZ6 492 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 TCP11X1B4DZS4 312 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 CLDN4O14493 209 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 CTNSO60931 367 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 EEDO75530 441 aaKnown RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 SEMA3DO95025 777 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 F10P00742 488 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 PTX3P26022 381 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 BSGP35613 385 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 HSD17B3P37058 310 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 GPR143P51810 404 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 NEK2P51955 445 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 CDH13P55290 713 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 RAC1P63000 192 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 PHEXP78562 749 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 IGLV3-21P80748 117 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 SLC13A2Q13183 592 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 RCN2Q14257 317 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 UNC50Q53HI1 259 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF678Q5SXM1 525 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 C10orf62Q5T681 223 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 FAM219BQ5XKK7 198 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 FRG2Q64ET8 278 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 MRM1Q6IN84 353 aaKnown RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 LETMD1Q6P1Q0 360 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 CLNKQ7Z7G1 428 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 DMRTC2Q8IXT2 367 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 BEST3Q8N1M1 668 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 OR4F6Q8NGB9 312 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 EPS8L3Q8TE67 593 aaKnown RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 AENQ8WTP8 325 aaKnown RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 ANKRD9Q96BM1 317 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF354BQ96LW1 612 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 FRG2BQ96QU4 278 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 DDX31Q9H8H2 851 aaKnown RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 ADAP2Q9NPF8 381 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 STMN3Q9NZ72 180 aa10.46□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF223Q9UK11 482 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-211ENST00000590499 A8MUA0 341 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 TMPRSS11DO60235 418 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 VPS4BO75351 444 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 MYO1DO94832 1006 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 SLU7O95391 586 aaKnown RBP10.45□□□□□ -0.74
SMAD4-211ENST00000590499 OTCP00480 354 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 TSPAN8P19075 237 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 TAC1P20366 129 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 GNLYP22749 145 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 ATP5F1P24539 256 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-211ENST00000590499 SLCO1A2P46721 670 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 RAP1GDS1P52306 607 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 PRKAA2P54646 552 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 HNRNPH2P55795 449 aaKnown RBP10.45□□□□□ -0.74
SMAD4-211ENST00000590499 CLCQ05315 142 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 SLAMF1Q13291 335 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 ELAVL1Q15717 326 aaKnown RBP10.45□□□□□ -0.74
SMAD4-211ENST00000590499 INAQ16352 499 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 MEP1AQ16819 746 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 WDR93Q6P2C0 686 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 MILR1Q7Z6M3 343 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 SLC5A8Q8N695 610 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 MDS2Q8NDY4 140 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 B3GNT7Q8NFL0 401 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 MYRIPQ8NFW9 859 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 OR1N1Q8NGS0 311 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 ATP6V1E2Q96A05 226 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 L3HYPDHQ96EM0 354 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 MAGEB10Q96LZ2 347 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-211ENST00000590499 TAAR6Q96RI8 345 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 ZNF382Q96SR6 550 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 SERPINI1Q99574 410 aa10.45□□□□□ -0.74
SMAD4-211ENST00000590499 CENPKQ9BS16 269 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms