RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CLCN2P51788 898 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 TDGF1P3P51864 188 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 NAGLUP54802 743 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 DNAJB13P59910 316 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 RAE1P78406 368 aaKnown RBP16.96■□□□□ 0.31
DDX39A-212ENST00000590260 STX4Q12846 297 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 OR1C1Q15619 314 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 CCDC153Q494R4 210 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 C10orf62Q5T681 223 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-212ENST00000590260 FRMD7Q6ZUT3 714 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 ATCAYQ86WG3 371 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 TMEM132CQ8N3T6 1108 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 RIBC1Q8N443 379 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-212ENST00000590260 ZNF721Q8TF20 911 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 FAR1Q8WVX9 515 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 TANKQ92844 425 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 SCMH1Q96GD3 660 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 SLX1AQ9BQ83 275 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 CENPKQ9BS16 269 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 TMEM109Q9BVC6 243 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 DEFB126Q9BYW3 111 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 SLC29A3Q9BZD2 475 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 ACPTQ9BZG2 426 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 SLC17A7Q9P2U7 560 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 ADAM29Q9UKF5 820 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 VPS4AQ9UN37 437 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 SNX6Q9UNH7 406 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 PLLPQ9Y342 182 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 SPACA6W5XKT8 324 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 C17orf105B2RV13 164 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 ESRRBO95718 433 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 CLPSP04118 112 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 IGKV3-11P04433 115 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 RNF224P0DH78 156 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 NR2F6P10588 404 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 CPA3P15088 417 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 TRHRP34981 398 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-212ENST00000590260 STT3AP46977 705 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 PKNOX1P55347 436 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 TAS2R50P59544 299 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 SERTAD2Q14140 314 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 EIF2S3LQ2VIR3 472 aaKnown RBP16.95■□□□□ 0.3
DDX39A-212ENST00000590260 ZNF766Q5HY98 468 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 CYP20A1Q6UW02 462 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 SCIMPQ6UWF3 145 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 C10orf107Q8IVU9 208 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 C1orf52Q8N6N3 182 aaKnown RBP16.95■□□□□ 0.3
DDX39A-212ENST00000590260 CCNYL1Q8N7R7 359 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 MORN4Q8NDC4 146 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 OR14A16Q8NHC5 309 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 RDH11Q8TC12 318 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 METTL6Q8TCB7 284 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 SLC2A12Q8TD20 617 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 CHTF18Q8WVB6 975 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 TM4SF18Q96CE8 201 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 C11orf24Q96F05 449 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-212ENST00000590260 APOPT1Q96IL0 206 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 UTP23Q9BRU9 249 aaKnown RBP16.95■□□□□ 0.3
DDX39A-212ENST00000590260 CES1P1Q9UKY3 287 aa16.95■□□□□ 0.3
DDX39A-212ENST00000590260 GPR75O95800 540 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 MLYCDO95822 493 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 MST1P26927 711 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 SOX18P35713 384 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 BUD31P41223 144 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-212ENST00000590260 ZNF844Q08AG5 666 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 ZNF750Q32MQ0 723 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 NDUFAF5Q5TEU4 345 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 SRRM1Q8IYB3 904 aaKnown RBP16.94■□□□□ 0.3
DDX39A-212ENST00000590260 CCDC126Q96EE4 140 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 GATA5Q9BWX5 397 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-212ENST00000590260 ROPN1BQ9BZX4 212 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-212ENST00000590260 OR8D2Q9GZM6 311 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 ROPN1Q9HAT0 212 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-212ENST00000590260 MID1IP1Q9NPA3 183 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 PCDHGB6Q9Y5F9 930 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 CLCA3PQ9Y6N3 262 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 CNTRLQ7Z7A1 2325 aa16.94■□□□□ 0.3
DDX39A-212ENST00000590260 SERTM1A2A2V5 107 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 SEMA7AO75326 666 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 SPAG7O75391 227 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 ITGA10O75578 1167 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 KRT6AP02538 564 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 KRT6BP04259 564 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 ALOX15P16050 662 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-212ENST00000590260 SERPINB3P29508 390 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 KRT6CP48668 564 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 HMGCS1Q01581 520 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 DUSP2Q05923 314 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 CSTF3Q12996 717 aaKnown RBP16.93■□□□□ 0.3
DDX39A-212ENST00000590260 CCNYL2Q5T2Q4 361 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 C9orf40Q8IXQ3 194 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 DAZLQ92904 295 aaKnown RBP16.93■□□□□ 0.3
DDX39A-212ENST00000590260 ZBTB9Q96C00 473 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 APIPQ96GX9 242 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 SENP5Q96HI0 755 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-212ENST00000590260 MECRQ9BV79 373 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 SHCBP1LQ9BZQ2 653 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 KLHL1Q9NR64 748 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 LRFN1Q9P244 771 aa16.93■□□□□ 0.3
DDX39A-212ENST00000590260 VPS29Q9UBQ0 182 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms