RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 STX16-NPEPL1H3BU86 382 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 CYR61O00622 381 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 CLDN4O14493 209 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 STX16O14662 325 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 KLF11O14901 512 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 LRRTM2O43300 516 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 ITM2AO43736 263 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 SNNO75324 88 aaPredicted RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 IFNA16P05015 189 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 ATP5A1P25705 553 aaKnown RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 MST1P26927 711 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 GSTM2P28161 218 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 TPP2P29144 1249 aaPredicted RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 ARL1P40616 181 aaPredicted RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 CASP2P42575 452 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 PIK3CGP48736 1102 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 SEC24CP53992 1094 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 NAGLUP54802 743 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 ALDH18A1P54886 795 aaKnown RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 STX3Q13277 289 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 RCN2Q14257 317 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 AP5B1Q2VPB7 878 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 ADPRMQ3LIE5 342 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 UNC50Q53HI1 259 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 FAM219BQ5XKK7 198 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 ZNF793Q6ZN11 406 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 CHSY3Q70JA7 882 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 SCUBE1Q8IWY4 988 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 ACOT4Q8N9L9 421 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 ELP5Q8TE02 316 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 UBE2E3Q969T4 207 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 MTFMTQ96DP5 389 aaKnown RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 CCDC126Q96EE4 140 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 L3HYPDHQ96EM0 354 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 SEC16BQ96JE7 1060 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 NSUN5Q96P11 429 aaKnown RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 ZNF317Q96PQ6 595 aaPredicted RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 KCNC2Q96PR1 638 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 MTERF1Q99551 399 aaKnown RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 SLX1AQ9BQ83 275 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 MS4A8Q9BY19 250 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 DEFB126Q9BYW3 111 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 ACTR8Q9H981 624 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 LIN28AQ9H9Z2 209 aaKnown RBP10.79□□□□□ -0.68
RFX1-204ENST00000588885 FGFR1OP2Q9NVK5 253 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 FBXW2Q9UKT8 454 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 RNF11Q9Y3C5 154 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 MMACHCQ9Y4U1 282 aa10.79□□□□□ -0.68
RFX1-204ENST00000588885 MYO7BQ6PIF6 2116 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 TMEM114B3SHH9 223 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 NPHS1O60500 1241 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 LDB3O75112 727 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 UNC5CO95185 931 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 CHRNGP07510 517 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 VIMP08670 466 aaKnown RBP10.78□□□□□ -0.68
RFX1-204ENST00000588885 TSPAN8P19075 237 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 TNNI3P19429 210 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 DRD4P21917 467 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 COL8A1P27658 744 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 NEK2P51955 445 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 PER3P56645 1201 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 HSD17B7P56937 341 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 MLF1P58340 268 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 ABCE1P61221 599 aaKnown RBP10.78□□□□□ -0.68
RFX1-204ENST00000588885 HERVK_113P63132 956 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 OCRLQ01968 901 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 ASPHQ12797 758 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 STX4Q12846 297 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 GTF2H2Q13888 395 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 CPSF6Q16630 551 aaKnown RBP eCLIP10.78□□□□□ -0.68
RFX1-204ENST00000588885 C1QL3Q5VWW1 255 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 ATG16L1Q676U5 607 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 ZNF324BQ6AW86 544 aaPredicted RBP10.78□□□□□ -0.68
RFX1-204ENST00000588885 GRHL2Q6ISB3 625 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 CGB2Q6NT52 195 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 GTF2H2CQ6P1K8 395 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 GFRALQ6UXV0 394 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 C16orf47Q6ZP98 133 aaPredicted RBP10.78□□□□□ -0.68
RFX1-204ENST00000588885 FRMD7Q6ZUT3 714 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 MAMDC2Q7Z304 686 aaPredicted RBP10.78□□□□□ -0.68
RFX1-204ENST00000588885 GOLGA7Q7Z5G4 137 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 OR4N5Q8IXE1 308 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 ZNF595Q8IYB9 648 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 LAS2Q8IYD9 372 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 HUS1BQ8NHY5 278 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 ZNF483Q8TF39 744 aaPredicted RBP10.78□□□□□ -0.68
RFX1-204ENST00000588885 NR4A3Q92570 626 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 NCLNQ969V3 563 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 CMTM7Q96FZ5 175 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 CHMP6Q96FZ7 201 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 CDK15Q96Q40 435 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 SORT1Q99523 831 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 TBCDQ9BTW9 1192 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 ERVK-6Q9BXR3 956 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 ALOXE3Q9BYJ1 711 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 C20orf27Q9GZN8 174 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 FAM107BQ9H098 131 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 TSPAN10Q9H1Z9 355 aaPredicted RBP10.78□□□□□ -0.68
RFX1-204ENST00000588885 NOL11Q9H8H0 719 aaKnown RBP10.78□□□□□ -0.68
RFX1-204ENST00000588885 IPPKQ9H8X2 491 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms