RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 PDCD2Q16342 344 aaPredicted RBP20.07■□□□□ 0.8
RETREG3-204ENST00000586796 EXT1Q16394 746 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 SOWAHCQ53LP3 525 aaPredicted RBP20.07■□□□□ 0.8
RETREG3-204ENST00000586796 ATG16L1Q676U5 607 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 PLAG1Q6DJT9 500 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 OR52E8Q6IFG1 317 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 HOMEZQ8IX15 550 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 SIRT6Q8N6T7 355 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 BRIX1Q8TDN6 353 aaKnown RBP20.07■□□□□ 0.8
RETREG3-204ENST00000586796 C16orf78Q8WTQ4 265 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 PPWD1Q96BP3 646 aaKnown RBP20.07■□□□□ 0.8
RETREG3-204ENST00000586796 DGAT2Q96PD7 388 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 FAIM2Q9BWQ8 316 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 SLC25A18Q9H1K4 315 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 ZNF552Q9H707 407 aaPredicted RBP20.07■□□□□ 0.8
RETREG3-204ENST00000586796 PNPOQ9NVS9 261 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 C5AR2Q9P296 337 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 PTGFRNQ9P2B2 879 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 GIMAP2Q9UG22 337 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 DLGAP4Q9Y2H0 992 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 PCDHA9Q9Y5H5 950 aa20.07■□□□□ 0.8
RETREG3-204ENST00000586796 ATP6AP2A0A1C7CYW4 349 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 A8MUI8 341 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 ATP6AP2O75787 350 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 GPR75O95800 540 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 TRA2BP62995 288 aaKnown RBP20.06■□□□□ 0.8
RETREG3-204ENST00000586796 RPL38P63173 70 aaKnown RBP20.06■□□□□ 0.8
RETREG3-204ENST00000586796 LACTB2Q53H82 288 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-204ENST00000586796 NOXRED1Q6NXP6 359 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 RNF165Q6ZSG1 346 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 ASB18Q6ZVZ8 466 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 DNAJB14Q8TBM8 379 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 M1APQ8TC57 530 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 DOK4Q8TEW6 326 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 DYDC1Q8WWB3 177 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 C3orf30Q96M34 536 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 KCNK13Q9HB14 408 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 ADAP2Q9NPF8 381 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 VTI1BQ9UEU0 232 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-204ENST00000586796 PCDHGA9Q9Y5G4 932 aaKnown RBP20.06■□□□□ 0.8
RETREG3-204ENST00000586796 CLCA3PQ9Y6N3 262 aa20.06■□□□□ 0.8
RETREG3-204ENST00000586796 C1orf226A1L170 272 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 EIF4E1BA6NMX2 242 aaKnown RBP20.05■□□□□ 0.8
RETREG3-204ENST00000586796 PEX11AO75192 247 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 SNUPNO95149 360 aaKnown RBP20.05■□□□□ 0.8
RETREG3-204ENST00000586796 PRB1P04280 392 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 JUNP05412 331 aaKnown RBP20.05■□□□□ 0.8
RETREG3-204ENST00000586796 PRPH2P23942 346 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 PIK3R1P27986 724 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 ELAVL1Q15717 326 aaKnown RBP20.05■□□□□ 0.8
RETREG3-204ENST00000586796 AGAP7PQ5VUJ5 663 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 B3GNTL1Q67FW5 361 aaPredicted RBP20.05■□□□□ 0.8
RETREG3-204ENST00000586796 TCTN3Q6NUS6 607 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 GALNT18Q6P9A2 607 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 LINC00696Q6ZRV3 163 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 KIF2BQ8N4N8 673 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 LSM14AQ8ND56 463 aaKnown RBP20.05■□□□□ 0.8
RETREG3-204ENST00000586796 OR4K14Q8NGD5 310 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 C11orf24Q96F05 449 aaPredicted RBP20.05■□□□□ 0.8
RETREG3-204ENST00000586796 RBM18Q96H35 190 aaKnown RBP20.05■□□□□ 0.8
RETREG3-204ENST00000586796 AGAP4Q96P64 663 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 THAP1Q9NVV9 213 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 SIRT5Q9NXA8 310 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 HEY2Q9UBP5 337 aa20.05■□□□□ 0.8
RETREG3-204ENST00000586796 MED13Q9UHV7 2174 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 A0A1W2PS29 197 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 C17orf105B2RV13 164 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 LSM1O15116 133 aaKnown RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 OR10H2O60403 315 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 ERAL1O75616 437 aaKnown RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 ALPPP05187 535 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 ALOX15P16050 662 aaPredicted RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 STT3AP46977 705 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 AP2B1P63010 937 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 IGLV3-21P80748 117 aaPredicted RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 ZNF763Q0D2J5 394 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 NFATC3Q12968 1075 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 KIAA0040Q15053 153 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 ZNF750Q32MQ0 723 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 RFTN2Q52LD8 501 aaPredicted RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 VWA5B1Q5TIE3 1220 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 FCRLBQ6BAA4 426 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 FAM180BQ6P0A1 224 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 SLC48A1Q6P1K1 146 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 PTRH1Q86Y79 214 aaKnown RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 TMEM132CQ8N3T6 1108 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 NFAM1Q8NET5 270 aaPredicted RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 FAM76AQ8TAV0 307 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 RAB3IL1Q8TBN0 382 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 PSMF1Q92530 271 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 ZNF75CPQ92670 426 aaPredicted RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 C19orf60Q96EN9 201 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 SMAD5Q99717 465 aaKnown RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 ZBTB20Q9HC78 741 aaPredicted RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 MMP25Q9NPA2 562 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 PFDN4Q9NQP4 134 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 MARCOQ9UEW3 520 aaPredicted RBP20.04■□□□□ 0.8
RETREG3-204ENST00000586796 ZNF451Q9Y4E5 1061 aa20.04■□□□□ 0.8
RETREG3-204ENST00000586796 SYNDIG1LA6NDD5 238 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms