RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 POLDIP3Q9BY77 421 aaKnown RBP13.34□□□□□ -0.27
SDF2-202ENST00000585428 COPS7BQ9H9Q2 264 aaPredicted RBP13.34□□□□□ -0.27
SDF2-202ENST00000585428 RASSF1Q9NS23 344 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 ALKBH4Q9NXW9 302 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 SPRR3Q9UBC9 169 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 ST6GALNAC2Q9UJ37 374 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 PHF3Q92576 2039 aaKnown RBP13.34□□□□□ -0.27
SDF2-202ENST00000585428 ITPR3Q14573 2671 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 PRRC2AP48634 2157 aaKnown RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 FAM47E-STBD1D6RA91 191 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 E7ESA3 106 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 RTCAO00442 366 aaKnown RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 FGF17O60258 216 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 CCDC166P0CW27 439 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 CD1DP15813 335 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 KLK2P20151 261 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 HIST1H1TP22492 207 aaPredicted RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 KIR2DL3P43628 341 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 STT3AP46977 705 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 ID2Q02363 134 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 TBL3Q12788 808 aaKnown RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 ILF2Q12905 390 aaKnown RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 SNTB1Q13884 538 aaKnown RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 FASTKD3Q14CZ7 662 aaKnown RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 OR4D1Q15615 310 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 PDK4Q16654 411 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 HIST2H2ACQ16777 129 aaPredicted RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 TMEM35AQ53FP2 167 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 HIST2H2AA3Q6FI13 130 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 POMZP3Q6PJE2 187 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 DGAT2L6Q6ZPD8 337 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 OR4N5Q8IXE1 308 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 C9orf40Q8IXQ3 194 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 LAS2Q8IYD9 372 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 ZZZ3Q8IYH5 903 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 LRRC25Q8N386 305 aaPredicted RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 CHDHQ8NE62 594 aaPredicted RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 FBXO36Q8NEA4 188 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 PPWD1Q96BP3 646 aaKnown RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 RBM18Q96H35 190 aaKnown RBP13.33□□□□□ -0.28
SDF2-202ENST00000585428 UBXN10Q96LJ8 280 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 MS4A8Q9BY19 250 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 ZFP64Q9NPA5 681 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 SMYD2Q9NRG4 433 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 QPCTLQ9NXS2 382 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 NSMCE4AQ9NXX6 385 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 CRIM1Q9NZV1 1036 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 COPS7AQ9UBW8 275 aa13.33□□□□□ -0.28
SDF2-202ENST00000585428 MAP1AP78559 2803 aaPredicted RBP13.32□□□□□ -0.28
SDF2-202ENST00000585428 ZNF407Q9C0G0 2248 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 HSPB2A8KAH6 182 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 AHRRA9YTQ3 701 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 HRKO00198 91 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 PROM1O43490 865 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 PIAS1O75925 651 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 SEC31AO94979 1220 aaKnown RBP13.32□□□□□ -0.28
SDF2-202ENST00000585428 TGFB1P01137 390 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 CEACAM8P31997 349 aaPredicted RBP13.32□□□□□ -0.28
SDF2-202ENST00000585428 PEX19P40855 299 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 IRF8Q02556 426 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 PDIA2Q13087 525 aaKnown RBP13.32□□□□□ -0.28
SDF2-202ENST00000585428 CHIT1Q13231 466 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 SLAMF1Q13291 335 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 HSPB2Q16082 182 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 AP5B1Q2VPB7 878 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 PAGE2BQ5JRK9 111 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 DEPDC1Q5TB30 811 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 OR4C11Q6IEV9 310 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 CHSY3Q70JA7 882 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 ULK2Q8IYT8 1036 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 SNX31Q8N9S9 440 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 PDPRQ8NCN5 879 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 BBOF1Q8ND07 529 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 NEIL3Q8TAT5 605 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 TANKQ92844 425 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 SPACA9Q96E40 222 aaPredicted RBP13.32□□□□□ -0.28
SDF2-202ENST00000585428 RUNDC3BQ96NL0 473 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 GPATCH1Q9BRR8 931 aaKnown RBP13.32□□□□□ -0.28
SDF2-202ENST00000585428 CD244Q9BZW8 370 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 ZNF703Q9H7S9 590 aaPredicted RBP13.32□□□□□ -0.28
SDF2-202ENST00000585428 CAB39LQ9H9S4 337 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 DLL4Q9NR61 685 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 WWOXQ9NZC7 414 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 CNIH4Q9P003 139 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 B4GALT7Q9UBV7 327 aa13.32□□□□□ -0.28
SDF2-202ENST00000585428 CHCHD2Q9Y6H1 151 aaPredicted RBP13.32□□□□□ -0.28
SDF2-202ENST00000585428 INTS1Q8N201 2190 aaKnown RBP13.32□□□□□ -0.28
SDF2-202ENST00000585428 LRRC3CA6NJW4 275 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 CXorf49A8MYA2 514 aaPredicted RBP13.31□□□□□ -0.28
SDF2-202ENST00000585428 EPPINO95925 133 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 C1QAP02745 245 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 FBXO45P0C2W1 286 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 COX7A2P14406 83 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 CPN2P22792 545 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 MSH2P43246 934 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 SLC12A2P55011 1212 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 ATP6V0D1P61421 351 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 DR1Q01658 176 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 DAZAP2Q15038 168 aaPredicted RBP13.31□□□□□ -0.28
SDF2-202ENST00000585428 FBXL19-AS1Q494R0 122 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms