RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 JAK1P23458 1154 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 CASP2P42575 452 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 NAGLUP54802 743 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 HYAL2Q12891 473 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 PCLAFQ15004 111 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 TBCCQ15814 346 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 CPSF6Q16630 551 aaKnown RBP eCLIP14.6□□□□□ -0.07
SKA2-209ENST00000583976 KRTCAP3Q53RY4 240 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 LIPJQ5W064 366 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 FAM219BQ5XKK7 198 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 GRHL2Q6ISB3 625 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 MED27Q6P2C8 311 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 QSOX2Q6ZRP7 698 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 MILR1Q7Z6M3 343 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 DOLPP1Q86YN1 238 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 GHDCQ8N2G8 530 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 FAM98AQ8NCA5 519 aaKnown RBP14.6□□□□□ -0.07
SKA2-209ENST00000583976 TRPV3Q8NET8 790 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 NT5CQ8TCD5 201 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 UTP15Q8TED0 518 aaKnown RBP14.6□□□□□ -0.07
SKA2-209ENST00000583976 L3HYPDHQ96EM0 354 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 PTCHD1Q96NR3 888 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 DMRTA2Q96SC8 542 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 MECRQ9BV79 373 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 C1QTNF3Q9BXJ4 246 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 STMN4Q9H169 189 aaPredicted RBP14.6□□□□□ -0.07
SKA2-209ENST00000583976 KLHL31Q9H511 634 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 NT5DC2Q9H857 520 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 OXSMQ9NWU1 459 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 MID2Q9UJV3 735 aa14.6□□□□□ -0.07
SKA2-209ENST00000583976 ZFHX3Q15911 3703 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 A0A0G2JN53 185 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 TRBV11-1A0A0K0K1C0 115 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 A0A1B0GTL3 188 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 SH3BGRLO75368 114 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 MLYCDO95822 493 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 PPP2R1BP30154 601 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 ALDH3A1P30838 453 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 MEOX1P50221 254 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 MLF1P58340 268 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 MAGOHP61326 146 aaKnown RBP14.59□□□□□ -0.07
SKA2-209ENST00000583976 RGS1Q08116 209 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 PCDH1Q08174 1060 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 PWP1Q13610 501 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 DDX39BQ13838 428 aaKnown RBP14.59□□□□□ -0.07
SKA2-209ENST00000583976 CFAP157Q5JU67 520 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 VN1R5Q7Z5H4 357 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 CD163Q86VB7 1156 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 RNF175Q8N4F7 328 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 MARVELD2Q8N4S9 558 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 NFAM1Q8NET5 270 aaPredicted RBP14.59□□□□□ -0.07
SKA2-209ENST00000583976 TTLQ8NG68 377 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 OR4F6Q8NGB9 312 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 CREB3L4Q8TEY5 395 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 SREK1Q8WXA9 508 aaKnown RBP14.59□□□□□ -0.07
SKA2-209ENST00000583976 ARL8AQ96BM9 186 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 SDCCAG3Q96C92 435 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 SLC6A16Q9GZN6 736 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 PITHD1Q9GZP4 211 aaPredicted RBP14.59□□□□□ -0.07
SKA2-209ENST00000583976 ZNF223Q9UK11 482 aaPredicted RBP14.59□□□□□ -0.07
SKA2-209ENST00000583976 PPT2Q9UMR5 302 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 ACTL7BQ9Y614 415 aa14.59□□□□□ -0.07
SKA2-209ENST00000583976 TCRBV16S1A1N1A0A5B0 115 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 WDR91A4D1P6 747 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 TGFBR3LH3BV60 316 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 TFECO14948 347 aaPredicted RBP14.58□□□□□ -0.08
SKA2-209ENST00000583976 PRMT3O60678 531 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 SASH3O75995 380 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 OR4F21O95013 312 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 OTCP00480 354 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 IL10P22301 178 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 CYB561P49447 251 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 DNAJB13P59910 316 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 GPR85P60893 370 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 TRAF3Q13114 568 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 MPP2Q14168 576 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 E2F2Q14209 437 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 TOR1AIP1Q5JTV8 583 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 LIPMQ5VYY2 423 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 TTC19Q6DKK2 380 aaPredicted RBP14.58□□□□□ -0.08
SKA2-209ENST00000583976 C16orf47Q6ZP98 133 aaPredicted RBP14.58□□□□□ -0.08
SKA2-209ENST00000583976 ABHD13Q7L211 337 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 RPRMLQ8N4K4 120 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 HORMAD2Q8N7B1 307 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 ANKRD42Q8N9B4 389 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 L3MBTL4Q8NA19 623 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 APCDD1LQ8NCL9 501 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 OR7G3Q8NG95 312 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 UBE2E3Q969T4 207 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 NTMT1Q9BV86 223 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 SHCBP1LQ9BZQ2 653 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 GSTO2Q9H4Y5 243 aa14.58□□□□□ -0.08
SKA2-209ENST00000583976 SSU72Q9NP77 194 aaKnown RBP14.58□□□□□ -0.08
SKA2-209ENST00000583976 HS6ST1O60243 411 aa14.57□□□□□ -0.08
SKA2-209ENST00000583976 CDC40O60508 579 aaKnown RBP eCLIP14.57□□□□□ -0.08
SKA2-209ENST00000583976 UGDHO60701 494 aa14.57□□□□□ -0.08
SKA2-209ENST00000583976 TRIM13O60858 407 aa14.57□□□□□ -0.08
SKA2-209ENST00000583976 MYO1DO94832 1006 aa14.57□□□□□ -0.08
SKA2-209ENST00000583976 TGFB1P01137 390 aa14.57□□□□□ -0.08
SKA2-209ENST00000583976 SERPINA6P08185 405 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms