RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 PAIP1Q9H074 479 aaKnown RBP17.1■□□□□ 0.33
NDEL1-217ENST00000583683 ZNF304Q9HCX3 659 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 GID8Q9NWU2 228 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 NDE1Q9NXR1 346 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 NEUROG3Q9Y4Z2 214 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 PCDHGA7Q9Y5G6 932 aa17.1■□□□□ 0.33
NDEL1-217ENST00000583683 RFXANKO14593 260 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 GSC2O15499 205 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 PDPK1O15530 556 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 GFRA3O60609 400 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 ERAL1O75616 437 aaKnown RBP17.09■□□□□ 0.33
NDEL1-217ENST00000583683 CEACAM1P13688 526 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 HBA1P69905 142 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 LRRC74AQ0VAA2 488 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 DNAL1Q4LDG9 190 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 LRIF1Q5T3J3 769 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 C16orf89Q6UX73 402 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 DNAJC14Q6Y2X3 702 aaPredicted RBP17.09■□□□□ 0.33
NDEL1-217ENST00000583683 ADAMTS18Q8TE60 1221 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 CLIP3Q96DZ5 547 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 CADM1Q9BY67 442 aaKnown RBP17.09■□□□□ 0.33
NDEL1-217ENST00000583683 RBCK1Q9BYM8 510 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 SLC39A1Q9NY26 324 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 VAPAQ9P0L0 249 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 CROTQ9UKG9 612 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 PSME2Q9UL46 239 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 MAP4K5Q9Y4K4 846 aa17.09■□□□□ 0.33
NDEL1-217ENST00000583683 PTPRZ1P23471 2315 aaPredicted RBP17.09■□□□□ 0.33
NDEL1-217ENST00000583683 A0A096LPI6 279 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 A0A1W2PRB8 838 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 A0A1W2PS29 197 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 ERN1O75460 977 aaKnown RBP17.08■□□□□ 0.33
NDEL1-217ENST00000583683 C6orf47O95873 294 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 HBQ1P09105 142 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 HOXB9P17482 250 aaPredicted RBP17.08■□□□□ 0.33
NDEL1-217ENST00000583683 ETV5P41161 510 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 XCR1P46094 333 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 TRPC1P48995 793 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 CEBPEQ15744 281 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 ZNF750Q32MQ0 723 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 DNAJB8Q8NHS0 232 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 TANKQ92844 425 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 COL26A1Q96A83 441 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 TBC1D20Q96BZ9 403 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 ZNF681Q96N22 645 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 ACSS1Q9NUB1 689 aaPredicted RBP17.08■□□□□ 0.33
NDEL1-217ENST00000583683 SLC25A37Q9NYZ2 338 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 PCDHB14Q9Y5E9 798 aa17.08■□□□□ 0.33
NDEL1-217ENST00000583683 NUP210LQ5VU65 1888 aa17.08■□□□□ 0.32
NDEL1-217ENST00000583683 KNTC1P50748 2209 aa17.08■□□□□ 0.32
NDEL1-217ENST00000583683 CEP250Q9BV73 2442 aa17.08■□□□□ 0.32
NDEL1-217ENST00000583683 TRBV5-3A0A0A0MS03 114 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 A0A1W2PNU3 283 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 PMS2P1A4D2B8 440 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 MYO1GB0I1T2 1018 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 LDB3O75112 727 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 CPSF4O95639 269 aaKnown RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 GSNP06396 782 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 C8orf89P0DMQ9 161 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 ATXN8OSP0DMR3 200 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 ZNF28P17035 718 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 FBLP22087 321 aaKnown RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 PSME3P61289 254 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 FOLH1Q04609 750 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 DUSP2Q05923 314 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 ABHD18Q0P651 414 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 GTDC1Q4AE62 458 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 ZNF385CQ66K41 422 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 OR4N5Q8IXE1 308 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 MSRB3Q8IXL7 192 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 OR4K14Q8NGD5 310 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 GOT1L1Q8NHS2 421 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 SUN3Q8TAQ9 357 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 ZBED6CLQ96FA7 236 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 CGREF1Q99674 301 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 HOPXQ9BPY8 73 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 SLC22A11Q9NSA0 550 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 ZNF780BQ9Y6R6 833 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 CNOT1A5YKK6 2376 aaKnown RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 SLC30A4O14863 429 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 FGF17O60258 216 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 CDC123O75794 336 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 SLC6A2P23975 617 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 RORAP35398 523 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 FEN1P39748 380 aaKnown RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 MANFP55145 182 aaKnown RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 KCNJ2P63252 427 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 ERV3-1Q14264 604 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 MLC1Q15049 377 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 ARHGAP40Q5TG30 622 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 NANOGP8Q6NSW7 305 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 MED25Q71SY5 747 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 COX15Q7KZN9 410 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 ZNF551Q7Z340 670 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-217ENST00000583683 OR4A15Q8NGL6 344 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 AMDHD1Q96NU7 426 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 BBS4Q96RK4 519 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 TRIM8Q9BZR9 551 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 GLIPR2Q9H4G4 154 aa17.07■□□□□ 0.32
NDEL1-217ENST00000583683 NANOGQ9H9S0 305 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms