RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 CFAP97Q9P2B7 532 aa4.35□□□□□ -1.71
PTPRM-215ENST00000583289 C3orf18Q9UK00 162 aa4.35□□□□□ -1.71
PTPRM-215ENST00000583289 RPS6KA6Q9UK32 745 aa4.35□□□□□ -1.71
PTPRM-215ENST00000583289 SLC45A2Q9UMX9 530 aa4.35□□□□□ -1.71
PTPRM-215ENST00000583289 SAMD4AQ9UPU9 718 aaKnown RBP4.35□□□□□ -1.71
PTPRM-215ENST00000583289 MAN2B2Q9Y2E5 1009 aa4.35□□□□□ -1.71
PTPRM-215ENST00000583289 CCL27Q9Y4X3 112 aa4.35□□□□□ -1.71
PTPRM-215ENST00000583289 FADS3Q9Y5Q0 445 aa4.35□□□□□ -1.71
PTPRM-215ENST00000583289 GMEB1Q9Y692 573 aa4.35□□□□□ -1.71
PTPRM-215ENST00000583289 LRRC14BA6NHZ5 514 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 LINC01548A6NM66 108 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 EIF4E1BA6NMX2 242 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 FAM220BPB1ANY3 271 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 LOC730098B7Z3J9 87 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CXCR6O00574 342 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ANKRD28O15084 1053 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 VILLO15195 856 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ACOX3O15254 700 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 TEX28O15482 410 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 TAPBPO15533 448 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 GJB3O75712 270 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 SLCO2B1O94956 709 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CSPG5O95196 566 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 PGM3O95394 542 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 GUCA1CO95843 209 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 TIMP1P01033 207 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CATP04040 527 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ABCB1P08183 1280 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CELA2AP08217 269 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 POU2F2P09086 479 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CLTBP09497 229 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 SMIM18P0DKX4 95 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 BCKDHAP12694 445 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 SRCP12931 536 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 JUPP14923 745 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ATP6V1B1P15313 513 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CKMT2P17540 419 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ATP6V1B2P21281 511 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 HSD17B2P37059 387 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 HSPA7P48741 367 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 GATMP50440 423 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 HLCSP50747 726 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ZNF81P51508 661 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ATXN3P54252 364 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ARSFP54793 590 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 TMBIM6P55061 237 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CCL23P55773 120 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 GABARAPL2P60520 117 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CXCR4P61073 352 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ST8SIA6P61647 398 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 PHEXP78562 749 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 GRSF1Q12849 480 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 LMAN2Q12907 356 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 DCTN2Q13561 401 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 DAG1Q14118 895 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 VEZF1Q14119 521 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CAPRIN1Q14444 709 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 GBX1Q14549 363 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ABRAXAS2Q15018 415 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 KIAA0040Q15053 153 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 NADK2Q4G0N4 442 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 RFTN2Q52LD8 501 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 PAGE2BQ5JRK9 111 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 PLAC9Q5JTB6 97 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 PAGE3Q5JUK9 113 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 DGKKQ5KSL6 1271 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 FRG2Q64ET8 278 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 SUMO4Q6EEV6 95 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 HMBOX1Q6NT76 420 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 NEK5Q6P3R8 708 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 RPS27LQ71UM5 84 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 LPCAT2Q7L5N7 544 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 R3HCC1LQ7Z5L2 792 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 TMEM173Q86WV6 379 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 SLC30A8Q8IWU4 369 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 KLHDC8AQ8IYD2 350 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 MICU2Q8IYU8 434 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CMTM8Q8IZV2 173 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 APCDD1Q8J025 514 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 C8orf59Q8N0T1 100 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CLEC4FQ8N1N0 589 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ZNF786Q8N393 782 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 ZCCHC7Q8N3Z6 543 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 SNX31Q8N9S9 440 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 FAM47BQ8NA70 645 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 OR52B6Q8NGF0 335 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 OR5K1Q8NHB7 308 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 MAGEE2Q8TD90 523 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 SETD7Q8WTS6 366 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 SCARB1Q8WTV0 552 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 CYGBQ8WWM9 190 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 GTF2H4Q92759 462 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 HDAC2Q92769 488 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 DPF1Q92782 380 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 NCLNQ969V3 563 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 FAM162AQ96A26 154 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 TMEM159Q96B96 161 aa4.34□□□□□ -1.71
PTPRM-215ENST00000583289 NMD3Q96D46 503 aaKnown RBP4.34□□□□□ -1.71
PTPRM-215ENST00000583289 MTERF3Q96E29 417 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms