RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	FGFR1OP	O95684	399 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	SYF2	O95926	243 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC4A1	P02730	911 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	C1QA	P02745	245 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CRYBA1	P05813	215 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CCDC159	P0C7I6	412 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	NPIPA8	P0DM63	369 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	SOX3	P41225	446 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	GRIA3	P42263	894 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CDK9	P50750	372 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CLCN2	P51788	898 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	HNRNPH2	P55795	449 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	OR4D2	P58180	307 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	POLR2F	P61218	127 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	RPL26	P61254	145 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	MAT1A	Q00266	395 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	FKBP3	Q00688	224 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	IL10RB	Q08334	325 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	GALNT2	Q10471	571 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	FUT7	Q11130	342 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	MAP4K2	Q12851	820 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	NAA25	Q14CX7	972 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	P2RY6	Q15077	328 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	TRIP10	Q15642	601 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	PPP2R5E	Q16537	467 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CYP1B1	Q16678	543 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CCDC40	Q4G0X9	1142 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	KLHDC7A	Q5VTJ3	777 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	DENND1B	Q6P3S1	775 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	TMEM270	Q6UE05	265 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CES3	Q6UWW8	571 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF793	Q6ZN11	406 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	C9orf139	Q6ZV77	190 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	INTS8	Q75QN2	995 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	HDX	Q7Z353	690 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM131B	Q86XD5	332 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	MAPKAPK5-AS1	Q8N8E1	139 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CNEP1R1	Q8N9A8	125 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CAMKV	Q8NCB2	501 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	DDHD1	Q8NEL9	900 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CCHCR1	Q8TD31	782 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	ABTB1	Q969K4	478 aa	Predicted RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	ISOC1	Q96CN7	298 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	ZG16B	Q96DA0	208 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	IQCD	Q96DY2	449 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	MS4A14	Q96JA4	679 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CCDC42	Q96M95	316 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	TTC25	Q96NG3	672 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF599	Q96NL3	588 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	FERD3L	Q96RJ6	166 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	RASL10B	Q96S79	203 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CPXM1	Q96SM3	734 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	OSBPL9	Q96SU4	736 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	TSG101	Q99816	390 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	LRRC27	Q9C0I9	530 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	OR52A5	Q9H2C5	316 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CENPH	Q9H3R5	247 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	PRDM13	Q9H4Q3	707 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	FANCF	Q9NPI8	374 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	CRLS1	Q9UJA2	301 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF223	Q9UK11	482 aa	Predicted RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	PTBP2	Q9UKA9	531 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	NENF	Q9UMX5	172 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	RPL26L1	Q9UNX3	145 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	RUVBL2	Q9Y230	463 aa	Known RBP	4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	KLHL20	Q9Y2M5	609 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772		A0A087X0T9	212 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	LOC105369274	A0A096LPK9	316 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	LOC102723532	A0A0G2JNH3	316 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC25A17	O43808	307 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	AKR1B10	O60218	316 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	GPC4	O75487	556 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	OR2J2	O76002	312 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SERPING1	P05155	500 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM228B	P0C875	321 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	TPBGL	P0DKB5	382 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC9A1	P19634	815 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	PON1	P27169	355 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	CHAT	P28329	748 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	CXCR5	P32302	372 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	XCR1	P46094	333 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	HK2	P52789	917 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	IRF9	Q00978	393 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC7A5	Q01650	507 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC6A3	Q01959	620 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	CKAP4	Q07065	602 aa	Known RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC10A7	Q0GE19	358 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	IFT88	Q13099	833 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SPA17	Q15506	151 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	CARTPT	Q16568	116 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	KNOP1	Q1ED39	458 aa	Known RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SWI5	Q1ZZU3	235 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	XKR6	Q5GH73	641 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF425	Q6IV72	752 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	GJB7	Q6PEY0	223 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	TMEM220	Q6QAJ8	160 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	IRF2BP2	Q7Z5L9	587 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	ZDHHC17	Q8IUH5	632 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms