RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TBC1D3IA0A087WXS9 549 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 TBC1D3EA0A087X179 549 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 TBC1D3KA0A087X1G2 549 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 TRBC2A0A5B9 178 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 TBC1D3FA6NER0 549 aaPredicted RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 TBC1D3LB9A6J9 549 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 LCMT2O60294 686 aaKnown RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 ADH1BP00325 375 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 EIF2S1P05198 315 aaKnown RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 TBC1D3HP0C7X1 549 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 UQCRC2P22695 453 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 SLC13A2Q13183 592 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 COL9A2Q14055 689 aaPredicted RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 MAD2L1BPQ15013 274 aaPredicted RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 MLF2Q15773 248 aaPredicted RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 ZNF776Q68DI1 518 aaPredicted RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 TBC1D3GQ6DHY5 549 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 TBC1D3CQ6IPX1 549 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 ADCK1Q86TW2 530 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 TBC1D3Q8IZP1 549 aaPredicted RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 OR9Q2Q8NGE9 314 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 ZNF300Q96RE9 604 aaPredicted RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 PCBD2Q9H0N5 130 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 DZANK1Q9NVP4 752 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 A0A1W2PPV9 198 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 EPOPA6NHQ4 379 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 GLOD5A6NK44 160 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 SLC22A1O15245 554 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 TMPRSS11DO60235 418 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 IFNA14P01570 189 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 SERPINB1P30740 379 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 GPC1P35052 558 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 BSGP35613 385 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 HSD17B2P37059 387 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 DGKEP52429 567 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 ATAD3BQ5T9A4 648 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 FAHD1Q6P587 224 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 TSEN54Q7Z6J9 526 aaKnown RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 AMER3Q8N944 861 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 FAR1Q8WVX9 515 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 UCN3Q969E3 161 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 TRMT61BQ9BVS5 477 aaKnown RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 ACSL5Q9ULC5 683 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 NDRG4Q9ULP0 352 aaKnown RBP13□□□□□ -0.33
SRSF1-205ENST00000582730 IFT52Q9Y366 437 aa13□□□□□ -0.33
SRSF1-205ENST00000582730 DNAJB5O75953 348 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 MT-ND2P03891 347 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 KRT20P35900 424 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 REEP5Q00765 189 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 IFITM2Q01629 132 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 SYCE2Q6PIF2 218 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 RD3Q7Z3Z2 195 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 ARMC8Q8IUR7 673 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 CCDC71Q8IV32 467 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 TAGAPQ8N103 731 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 HORMAD2Q8N7B1 307 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 HTRA1Q92743 480 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 GTPBP3Q969Y2 492 aaKnown RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 OTUB1Q96FW1 271 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 CAMK1GQ96NX5 476 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 ZNF717Q9BY31 904 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 NDEL1Q9GZM8 345 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 RHBGQ9H310 441 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 TMEM38AQ9H6F2 299 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 WASH6PQ9NQA3 447 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 NAALAD2Q9Y3Q0 740 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 WASHC1A8K0Z3 465 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 PCDHGA12O60330 932 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 PRKRAO75569 313 aaKnown RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 SEMA3DO95025 777 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 ARAFP10398 606 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 ERGP11308 486 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 SERPINB10P48595 397 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 WASH2PQ6VEQ5 465 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 TSPYL5Q86VY4 417 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 TP53I13Q8NBR0 393 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 GEMIN6Q8WXD5 167 aaKnown RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 RGMAQ96B86 450 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 QRFPRQ96P65 431 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 MENTQ9BUN1 341 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 PRDM8Q9NQV8 689 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 KLHL20Q9Y2M5 609 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 PRAMEF25A6NGN4 478 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 RGS10O43665 173 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 DNTTP04053 509 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 ALPPL2P10696 532 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 ITGA2P17301 1181 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 RAB28P51157 221 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 RPS21P63220 83 aaKnown RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 CSNK1G2P78368 415 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 CLCA4Q14CN2 919 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 PSMA8Q8TAA3 256 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 PHF10Q8WUB8 498 aaKnown RBP12.99□□□□□ -0.33
SRSF1-205ENST00000582730 CAPSLQ8WWF8 208 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 NIPSNAP1Q9BPW8 284 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 BTBD2Q9BX70 525 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 SLC17A9Q9BYT1 436 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 ZNF556Q9HAH1 456 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms