RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 DOCK6Q96HP0 2047 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 SMIM30A4D0T7 59 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 CCL16O15467 120 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 ALDH1A1P00352 501 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 ADAP00813 363 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 CYP17A1P05093 508 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 HBQ1P09105 142 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 PIPP12273 146 aaPredicted RBP13.03□□□□□ -0.32
RNF43-205ENST00000581868 ELAVL4P26378 380 aaKnown RBP13.03□□□□□ -0.32
RNF43-205ENST00000581868 OPRD1P41143 372 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 CCR2P41597 374 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 CRYBB2P43320 205 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 MANFP55145 182 aaKnown RBP13.03□□□□□ -0.32
RNF43-205ENST00000581868 RUNX1T1Q06455 604 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 HSPB3Q12988 150 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 TARDBPQ13148 414 aaKnown RBP eCLIP13.03□□□□□ -0.32
RNF43-205ENST00000581868 E2F2Q14209 437 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 NDUFA5Q16718 116 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 TCTN3Q6NUS6 607 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 LIPIQ6XZB0 460 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 NRTNQ99748 197 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 POLR2J3Q9H1A7 115 aaKnown RBP13.03□□□□□ -0.32
RNF43-205ENST00000581868 SLAMF7Q9NQ25 335 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 KCND3Q9UK17 655 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 V9GYH0 126 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 DSPPQ9NZW4 1301 aa13.03□□□□□ -0.32
RNF43-205ENST00000581868 OBSL1O75147 1896 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 CDRT1O95170 752 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 ZNF24P17028 368 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 HOXD10P28358 340 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 GJA8P48165 433 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 RFX2P48378 723 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 MRPS15P82914 257 aaKnown RBP13.02□□□□□ -0.32
RNF43-205ENST00000581868 ZNF91Q05481 1191 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 SPDYE7PQ495Y7 208 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 SZRD1Q7Z422 152 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 CHAC2Q8WUX2 184 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 PDXPQ96GD0 296 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 FAM83CQ9BQN1 747 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 SGPP1Q9BX95 441 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 MMP28Q9H239 520 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 SPATA7Q9P0W8 599 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 IL36AQ9UHA7 158 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.32
RNF43-205ENST00000581868 ARRDC5A6NEK1 342 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 K7ESM1 405 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 CAPN5O15484 640 aaPredicted RBP13.02□□□□□ -0.33
RNF43-205ENST00000581868 TLX2O43763 284 aaPredicted RBP13.02□□□□□ -0.33
RNF43-205ENST00000581868 H1F0P07305 194 aaKnown RBP13.02□□□□□ -0.33
RNF43-205ENST00000581868 C8AP07357 584 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 SNRPGP62308 76 aaKnown RBP13.02□□□□□ -0.33
RNF43-205ENST00000581868 ILKQ13418 452 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 GPR50Q13585 617 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 ZNF79Q15937 498 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 LY6G5CQ5SRR4 150 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 TMIGD1Q6UXZ0 262 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 TRIM69Q86WT6 500 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 RAB43Q86YS6 212 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 OR4D11Q8NGI4 311 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 IRF7Q92985 503 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 MTERF3Q96E29 417 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 TCEAL4Q96EI5 215 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 SLC6A18Q96N87 628 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 MND1Q9BWT6 205 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 FZD3Q9NPG1 666 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 CCDC177Q9NQR7 707 aaPredicted RBP13.02□□□□□ -0.33
RNF43-205ENST00000581868 SEMA3GQ9NS98 782 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 SEC14L4Q9UDX3 406 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 STUB1Q9UNE7 303 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 SSR3Q9UNL2 185 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 RPL36Q9Y3U8 105 aaKnown RBP13.02□□□□□ -0.33
RNF43-205ENST00000581868 NOX1Q9Y5S8 564 aa13.02□□□□□ -0.33
RNF43-205ENST00000581868 MKI67P46013 3256 aaKnown RBP13.01□□□□□ -0.33
RNF43-205ENST00000581868 A0A1W2PQ09 198 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 PLD2O14939 933 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 MYL12BO14950 172 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 APOL3O95236 402 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 CXCL10P02778 98 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 CLEC2LP0C7M8 214 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 IL7P13232 177 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 NNMTP40261 264 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 GSTM5P46439 218 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 NCF4Q15080 339 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 ZNF805Q5CZA5 627 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 SLX4IPQ5VYV7 408 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 FAM131AQ6UXB0 335 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 UNC5DQ6UXZ4 953 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 DPPA4Q7L190 304 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 VN1R5Q7Z5H4 357 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 DDX53Q86TM3 631 aaKnown RBP13.01□□□□□ -0.33
RNF43-205ENST00000581868 UBE2J2Q8N2K1 259 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 APOBEC4Q8WW27 367 aaKnown RBP13.01□□□□□ -0.33
RNF43-205ENST00000581868 WDR34Q96EX3 536 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 MVB12BQ9H7P6 319 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 MGAT4BQ9UQ53 548 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 BOLA1Q9Y3E2 137 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 HEPACAM2A8MVW5 462 aa13.01□□□□□ -0.33
RNF43-205ENST00000581868 ZNF670-ZNF695F2Z2N8 137 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms