RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 C11orf65Q8NCR3 313 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 TMEM52Q8NDY8 209 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 DENND6BQ8NEG7 585 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 ZNF555Q8NEP9 628 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 OR9Q2Q8NGE9 314 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 PSMA8Q8TAA3 256 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 SPPL2AQ8TCT8 520 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 ZFAND2BQ8WV99 257 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 HMGB4Q8WW32 186 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 HDAC2Q92769 488 aaKnown RBP4.38□□□□□ -1.71
NUP85-213ENST00000579838 TANKQ92844 425 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 RGMAQ96B86 450 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 C12orf43Q96C57 262 aaKnown RBP4.38□□□□□ -1.71
NUP85-213ENST00000579838 DGCR14Q96DF8 476 aaKnown RBP4.38□□□□□ -1.71
NUP85-213ENST00000579838 TM4SF19Q96DZ7 209 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 NEURL3Q96EH8 262 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 CNRIP1Q96F85 164 aaPredicted RBP4.38□□□□□ -1.71
NUP85-213ENST00000579838 C16orf58Q96GQ5 468 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 TMEM19Q96HH6 336 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 ABHD8Q96I13 439 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 MAGED4Q96JG8 741 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 SLC35G5Q96KT7 338 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 C10orf90Q96M02 699 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 RDH12Q96NR8 316 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 AMDHD1Q96NU7 426 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 OR2A14Q96R47 310 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 ZNF300Q96RE9 604 aaPredicted RBP4.38□□□□□ -1.71
NUP85-213ENST00000579838 PITX2Q99697 317 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 NIPSNAP1Q9BPW8 284 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 YIPF4Q9BSR8 244 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 DOHHQ9BU89 302 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 LHPPQ9H008 270 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 PCBD2Q9H0N5 130 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 OR51I1Q9H343 314 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 PRO3102Q9H379 93 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 OCEL1Q9H607 264 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 POLR1BQ9H9Y6 1135 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 A4GALTQ9NPC4 353 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 MIEF1Q9NQG6 463 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 THSD1Q9NS62 852 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 ATAD3AQ9NVI7 634 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 TUBA8Q9NY65 449 aaPredicted RBP4.38□□□□□ -1.71
NUP85-213ENST00000579838 ZNF226Q9NYT6 803 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 PTTG2Q9NZH5 202 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 USP36Q9P275 1121 aaKnown RBP4.38□□□□□ -1.71
NUP85-213ENST00000579838 ERVK-18Q9QC07 812 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 FBXW2Q9UKT8 454 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 CYP8B1Q9UNU6 501 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 MAPRE3Q9UPY8 281 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 RNF6Q9Y252 685 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 PADI2Q9Y2J8 665 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 NAALAD2Q9Y3Q0 740 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 SAMHD1Q9Y3Z3 626 aaKnown RBP4.38□□□□□ -1.71
NUP85-213ENST00000579838 PCDHGA2Q9Y5H1 932 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 SNX8Q9Y5X2 465 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 AP1M2Q9Y6Q5 423 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 COMMD3-BMI1R4GMX3 469 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 SCN2AQ99250 2005 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 SCN3AQ9NY46 2000 aa4.38□□□□□ -1.71
NUP85-213ENST00000579838 NUP214P35658 2090 aaPredicted RBP4.37□□□□□ -1.71
NUP85-213ENST00000579838 PRRC2BQ5JSZ5 2229 aaKnown RBP4.37□□□□□ -1.71
NUP85-213ENST00000579838 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 LOC105369274A0A096LPK9 316 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 LOC102723532A0A0G2JNH3 316 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 OR2A25A4D2G3 310 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 CCDC160A6NGH7 325 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 ZNF860A6NHJ4 632 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 CCDC85CA6NKD9 419 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 H3BMQ9 156 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 TNFRSF11BO00300 401 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 FOXD2O60548 495 aaPredicted RBP4.37□□□□□ -1.71
NUP85-213ENST00000579838 DPM1O60762 260 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 KCNJ13O60928 360 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 DNAJB5O75953 348 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 SEC14L2O76054 403 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 INMTO95050 263 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 MFN2O95140 757 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 MED26O95402 600 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 ZBTB11O95625 1053 aaPredicted RBP4.37□□□□□ -1.71
NUP85-213ENST00000579838 APBB3O95704 486 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 SEMA4FO95754 770 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 MT-ND2P03891 347 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 WNT1P04628 370 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 TP53P04637 393 aaPredicted RBP4.37□□□□□ -1.71
NUP85-213ENST00000579838 CHRM4P08173 479 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 SMIM10L1P0DMW3 83 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 OR12D1P0DN82 309 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 ACADMP11310 421 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 PCSK2P16519 638 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 POLR2CP19387 275 aaPredicted RBP4.37□□□□□ -1.71
NUP85-213ENST00000579838 MAGP20916 626 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 HIST1H1TP22492 207 aaPredicted RBP4.37□□□□□ -1.71
NUP85-213ENST00000579838 CBLP22681 906 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 CXCR2P25025 360 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 CMPK1P30085 196 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 SERPINB1P30740 379 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 RYKP34925 604 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 KRT20P35900 424 aa4.37□□□□□ -1.71
NUP85-213ENST00000579838 RPL3P39023 403 aaKnown RBP4.37□□□□□ -1.71
NUP85-213ENST00000579838 FEN1P39748 380 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms