RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LOC102723996A0A087X1L8 192 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 A0A0G2JN53 185 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 A0A1W2PS29 197 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 OR2W5A6NFC9 320 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF860A6NHJ4 632 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SRRM3A6NNA2 597 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM114B3SHH9 223 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 C21orf140B9A014 251 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SGK494L7N484 410 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TXNDC9O14530 226 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SOCS6O14544 535 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 DYNC1I1O14576 645 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 AZIN1O14977 448 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ANKRD28O15084 1053 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 LSM1O15116 133 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 RDH16O75452 317 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 JRKO75564 520 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 BMP10O95393 424 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MLYCDO95822 493 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SERPINE1P05121 402 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC35G6P0C7Q6 338 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 HSD3B1P14060 373 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ALOX12P18054 663 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 NME2P22392 152 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 HIST1H1TP22492 207 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CXCR2P25025 360 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TACR1P25103 407 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 HSD3B2P26439 372 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CERS1P27544 350 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 RBMS1P29558 406 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SERPINB1P30740 379 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TSFMP43897 325 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ZFP36L2P47974 494 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CCNG1P51959 295 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ARSFP54793 590 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 RAB8AP61006 207 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ABCE1P61221 599 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 NAA20P61599 178 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 RPS18P62269 152 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 PPP2R2AP63151 447 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 OLR1P78380 273 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 IGLV3-21P80748 117 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 HMGCS1Q01581 520 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 DUSP2Q05923 314 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 BTKQ06187 659 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CSTF3Q12996 717 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 DNASE1L3Q13609 305 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC9A5Q14940 896 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 RBBP5Q15291 538 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CHI3L2Q15782 390 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MPEG1Q2M385 716 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MUM1Q2TAK8 710 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM214AQ32MH5 1076 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 NKAIN1Q4KMZ8 207 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 DEFB134Q4QY38 66 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM35AQ53FP2 167 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 VWA2Q5GFL6 755 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 PAGE2BQ5JRK9 111 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 C10orf62Q5T681 223 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ATP1A1-AS1Q5TC04 95 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 C1orf189Q5VU69 101 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 PRMT9Q6P2P2 845 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CYB5D1Q6P9G0 228 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM205Q6UW68 189 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 C6orf15Q6UXA7 325 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 COMMD6Q7Z4G1 85 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 PPP1R32Q7Z5V6 425 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ADCK2Q7Z695 626 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MILR1Q7Z6M3 343 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CACNA2D3Q8IZS8 1091 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MMP21Q8N119 569 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 KRT78Q8N1N4 520 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ZCCHC7Q8N3Z6 543 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ESX1Q8N693 406 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 METTL27Q8N6F8 245 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CCNYL1Q8N7R7 359 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ENDOVQ8N8Q3 282 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ANKRD42Q8N9B4 389 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CAMKVQ8NCB2 501 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF248Q8NDW4 579 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TRPV3Q8NET8 790 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TTLQ8NG68 377 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 OR2Y1Q8NGV0 311 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 RAB3IL1Q8TBN0 382 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 STT3BQ8TCJ2 826 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 STK35Q8TDR2 534 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CHTF18Q8WVB6 975 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CKAP2Q8WWK9 683 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CMTM7Q96FZ5 175 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 APIPQ96GX9 242 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC45A3Q96JT2 553 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MAELQ96JY0 434 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 C7orf26Q96N11 449 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MTERF1Q99551 399 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MAPKAP1Q9BPZ7 522 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 C17orf62Q9BQA9 187 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 DPH2Q9BQC3 489 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 NDC1Q9BTX1 674 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MRPL1Q9BYD6 325 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 NLNQ9BYT8 704 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms