RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PMP22Q01453 160 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 HMGCS1Q01581 520 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 ZNF33BQ06732 778 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 MGAT2Q10469 447 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 CSTF3Q12996 717 aaKnown RBP8.07□□□□□ -1.12
SMG6-216ENST00000575176 SLAMF1Q13291 335 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 MPP2Q14168 576 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 KIAA0040Q15053 153 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 TLR1Q15399 786 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 UGT3A2Q3SY77 523 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 CCDC153Q494R4 210 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 RNFT1Q5M7Z0 435 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 GALNT18Q6P9A2 607 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 CHSY3Q70JA7 882 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 MILR1Q7Z6M3 343 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 GPR180Q86V85 440 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 SLC22A9Q8IVM8 553 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 C10orf107Q8IVU9 208 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 SIAH3Q8IW03 269 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 OR4N5Q8IXE1 308 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 CNPY4Q8N129 248 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 ZADH2Q8N4Q0 377 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 EFCAB3Q8N7B9 438 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 GALNT11Q8NCW6 608 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 SIMC1Q8NDZ2 872 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 OR2T11Q8NH01 316 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 SLC2A12Q8TD20 617 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 CHTF18Q8WVB6 975 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 NTNG2Q96CW9 530 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 REPS1Q96D71 796 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 MTFMTQ96DP5 389 aaKnown RBP8.07□□□□□ -1.12
SMG6-216ENST00000575176 APIPQ96GX9 242 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 VPS50Q96JG6 964 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 ZNF681Q96N22 645 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 FRMD6Q96NE9 622 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 ZIM3Q96PE6 472 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 SERPINI1Q99574 410 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 EPS8L2Q9H6S3 715 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 RPF2Q9H7B2 306 aaKnown RBP8.07□□□□□ -1.12
SMG6-216ENST00000575176 COPS7BQ9H9Q2 264 aaPredicted RBP8.07□□□□□ -1.12
SMG6-216ENST00000575176 SH2D2AQ9NP31 389 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 LYARQ9NX58 379 aaKnown RBP8.07□□□□□ -1.12
SMG6-216ENST00000575176 HEY2Q9UBP5 337 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 GRID1Q9ULK0 1009 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 TIMM22Q9Y584 194 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 PCDHGB6Q9Y5F9 930 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 TEX15Q9BXT5 2789 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 HRNRQ86YZ3 2850 aaPredicted RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 A0A0G2JMM0 328 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 TRBV11-1A0A0K0K1C0 115 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 A0A1W2PPB8 328 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 A0A1W2PRS3 328 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 ARHGAP10A1A4S6 786 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 BLACEA4D250 179 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 GLOD5A6NK44 160 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 TTLL8A6PVC2 850 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 GABRR3A8MPY1 467 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 KIR3DP1A8MWS1 328 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 TMEM233B4DJY2 109 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 COPEO14579 308 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 KLHL41O60662 606 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 CHRNGP07510 517 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 MYL2P10916 166 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 ICAM2P13598 275 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 HSD3B1P14060 373 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 KRT15P19012 456 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 TAC1P20366 129 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 CPN2P22792 545 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 PRPH2P23942 346 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 HSD3B2P26439 372 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 ALDH3A1P30838 453 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 NR0B1P51843 470 aaKnown RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 HK2P52789 917 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 SRSF11Q05519 484 aaKnown RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 TGM3Q08188 693 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 SLC13A2Q13183 592 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 CEBPEQ15744 281 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 INAQ16352 499 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 AP5B1Q2VPB7 878 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 ZNF750Q32MQ0 723 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 NDUFAF5Q5TEU4 345 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 LIPMQ5VYY2 423 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 KANK2Q63ZY3 851 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 OR52E8Q6IFG1 317 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 TRIM46Q7Z4K8 759 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 SRRM1Q8IYB3 904 aaKnown RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 CISD2Q8N5K1 135 aaKnown RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 C1orf52Q8N6N3 182 aaKnown RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 ARMC2Q8NEN0 867 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 OR1N1Q8NGS0 311 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 OR14A16Q8NHC5 309 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 SUN3Q8TAQ9 357 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 GRHL3Q8TE85 626 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 SELENOMQ8WWX9 145 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 TM9SF4Q92544 642 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 TM4SF18Q96CE8 201 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 CNRIP1Q96F85 164 aaPredicted RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 VMP1Q96GC9 406 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 FBXL20Q96IG2 436 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 FAM111AQ96PZ2 611 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms