RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	C6orf136	Q5SQH8	315 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	DEPDC1	Q5TB30	811 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	NXN	Q6DKJ4	435 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	ISLR2	Q6UXK2	745 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895		Q6ZS92	163 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
ABR-223	ENST00000573895	SRFBP1	Q8NEF9	429 aa	Known RBP	13.51	□□□□□ -0.25
ABR-223	ENST00000573895	CPT1C	Q8TCG5	803 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	GAL3ST3	Q96A11	431 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	TBC1D20	Q96BZ9	403 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	IMMP1L	Q96LU5	166 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	MTERF1	Q99551	399 aa	Known RBP	13.51	□□□□□ -0.25
ABR-223	ENST00000573895	EBF4	Q9BQW3	602 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	MESP1	Q9BRJ9	268 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	CENPK	Q9BS16	269 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	ACPT	Q9BZG2	426 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	EPS8L2	Q9H6S3	715 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	PRM3	Q9NNZ6	103 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	C1orf109	Q9NX04	203 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.51	□□□□□ -0.25
ABR-223	ENST00000573895	HEY2	Q9UBP5	337 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	TMED5	Q9Y3A6	229 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	USP9X	Q93008	2570 aa	Predicted RBP	13.51	□□□□□ -0.25
ABR-223	ENST00000573895	PTPN13	Q12923	2485 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	GOLGA8Q	A0A0J9YX86	632 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	ATP6AP2	A0A1C7CYW4	349 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	GOLGA8O	A6NCC3	632 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	LRIT2	A6NDA9	550 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	GOLGA8N	F8WBI6	632 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	PYCARD-AS1	I3L0S3	204 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	LSM1	O15116	133 aa	Known RBP	13.5	□□□□□ -0.25
ABR-223	ENST00000573895	CHST10	O43529	356 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	SEC22B	O75396	215 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	JRK	O75564	520 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	ATP6AP2	O75787	350 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	DCTN3	O75935	186 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	FH	P07954	510 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	JAK1	P23458	1154 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	RPS13	P62277	151 aa	Known RBP	13.5	□□□□□ -0.25
ABR-223	ENST00000573895	ERVK-8	P63133	956 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	EEF1A2	Q05639	463 aa	Known RBP	13.5	□□□□□ -0.25
ABR-223	ENST00000573895	MFAP5	Q13361	173 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	NR6A1	Q15406	480 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	IGFBP7	Q16270	282 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	AP5B1	Q2VPB7	878 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	ADPRM	Q3LIE5	342 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.5	□□□□□ -0.25
ABR-223	ENST00000573895	SPDYA	Q5MJ70	313 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	VN1R5	Q7Z5H4	357 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.5	□□□□□ -0.25
ABR-223	ENST00000573895	ATCAY	Q86WG3	371 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	FAM9C	Q8IZT9	166 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	EFCAB3	Q8N7B9	438 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	OR2T11	Q8NH01	316 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	PPP1R36	Q96LQ0	422 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	OR52B2	Q96RD2	323 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	WDR77	Q9BQA1	342 aa	Predicted RBP	13.5	□□□□□ -0.25
ABR-223	ENST00000573895	NPL	Q9BXD5	320 aa	Predicted RBP	13.5	□□□□□ -0.25
ABR-223	ENST00000573895	LRTM1	Q9HBL6	345 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.5	□□□□□ -0.25
ABR-223	ENST00000573895	LANCL2	Q9NS86	450 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	SIRT5	Q9NXA8	310 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895	SLC12A4	Q9UP95	1085 aa		13.5	□□□□□ -0.25
ABR-223	ENST00000573895		A0A088AWK7	358 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	UBD	O15205	165 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	PEX11A	O75192	247 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	MYO1D	O94832	1006 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	SEMA3D	O95025	777 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	TGFB1	P01137	390 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	ZNF10	P21506	573 aa	Predicted RBP	13.49	□□□□□ -0.25
ABR-223	ENST00000573895	MAPK1	P28482	360 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	ADSL	P30566	484 aa	Predicted RBP	13.49	□□□□□ -0.25
ABR-223	ENST00000573895	SOX11	P35716	441 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	HMGCS1	Q01581	520 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	RHAG	Q02094	409 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	TGM3	Q08188	693 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
ABR-223	ENST00000573895	INPP5J	Q15735	1006 aa	Predicted RBP	13.49	□□□□□ -0.25
ABR-223	ENST00000573895	GSTA3	Q16772	222 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	SPIN4	Q56A73	249 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	COLEC12	Q5KU26	742 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	MFSD4B	Q5TF39	518 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.49	□□□□□ -0.25
ABR-223	ENST00000573895	PLAG1	Q6DJT9	500 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	FAAH2	Q6GMR7	532 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	QSOX2	Q6ZRP7	698 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	GALNT11	Q8NCW6	608 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	OR5T3	Q8NGG3	340 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	CHTF18	Q8WVB6	975 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	PSMF1	Q92530	271 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	RGMA	Q96B86	450 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	PEX11G	Q96HA9	241 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	QRFPR	Q96P65	431 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	MS4A8	Q9BY19	250 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	MFRP	Q9BY79	579 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	ASIC5	Q9NY37	505 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	EIF3L	Q9Y262	564 aa	Known RBP	13.49	□□□□□ -0.25
ABR-223	ENST00000573895	PTGDR2	Q9Y5Y4	395 aa		13.49	□□□□□ -0.25
ABR-223	ENST00000573895	ZNF860	A6NHJ4	632 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	RRP9	O43818	475 aa	Known RBP	13.48	□□□□□ -0.25

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