RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 NSA2O95478 260 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 ONECUT2O95948 504 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 ZGLP1P0C6A0 271 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 ZNF888P0CJ79 500 aaPredicted RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 RNF224P0DH78 156 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 HIST1H1TP22492 207 aaPredicted RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 EPHA3P29320 983 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 TLX1P31314 330 aaPredicted RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 TIA1P31483 386 aaKnown RBP eCLIP11.15□□□□□ -0.62
NDE1-206ENST00000572967 HNRNPH1P31943 449 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 IDH3AP50213 366 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 MAPK12P53778 367 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 PLA2G16P53816 162 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 TRA2BP62995 288 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 SNRPNP63162 240 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 ZNF763Q0D2J5 394 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 RPS6KA2Q15349 733 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 SYT16Q17RD7 645 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 PLEKHN1Q494U1 663 aaPredicted RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 VWA2Q5GFL6 755 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 C6orf136Q5SQH8 315 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 FHL5Q5TD97 284 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 OR4C11Q6IEV9 310 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 ABHD17CQ6PCB6 329 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 SCIMPQ6UWF3 145 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 IKBIPQ70UQ0 350 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 COMMD6Q7Z4G1 85 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 ZCCHC7Q8N3Z6 543 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 ZADH2Q8N4Q0 377 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 C1orf52Q8N6N3 182 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 CCDC197Q8NCU1 140 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 OR11G2Q8NGC1 345 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 BCAS4Q8TDM0 211 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 UTP15Q8TED0 518 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 TM9SF4Q92544 642 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 SNRNP40Q96DI7 357 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 MMABQ96EY8 250 aaPredicted RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 THOC3Q96J01 351 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 PPP1R36Q96LQ0 422 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 F2RL3Q96RI0 385 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 ZBTB18Q99592 522 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 WDR77Q9BQA1 342 aaPredicted RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 MRPL1Q9BYD6 325 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 AKTIPQ9H8T0 292 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 WDR41Q9HAD4 459 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 ZNF160Q9HCG1 818 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 TRPC4Q9UBN4 977 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 C3orf18Q9UK00 162 aa11.15□□□□□ -0.62
NDE1-206ENST00000572967 MRPS33Q9Y291 106 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 MRPS2Q9Y399 296 aaKnown RBP11.15□□□□□ -0.62
NDE1-206ENST00000572967 NBASA2RRP1 2371 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 A0A0A6YYC8 382 aaPredicted RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 ATP6AP2A0A1C7CYW4 349 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 VSTM2BA6NLU5 285 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 I3L1I5 382 aaPredicted RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 PSMD12O00232 456 aaPredicted RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 PLPP1O14494 284 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 ZNF195O14628 629 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 SEMA7AO75326 666 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 ATP6AP2O75787 350 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 KLHL18O94889 574 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 PRR35P0CG20 571 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 IL10P22301 178 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 HPCAL1P37235 193 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 BUD31P41223 144 aaPredicted RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 CLNS1AP54105 237 aaKnown RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 RAB8AP61006 207 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 MAT1AQ00266 395 aaKnown RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 Q0VFX4 171 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 TBL3Q12788 808 aaKnown RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 DSG2Q14126 1118 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 DEFB134Q4QY38 66 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 SLC9B1Q4ZJI4 515 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 CCNYL2Q5T2Q4 361 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 ADNP2Q6IQ32 1131 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 Q6ZSR9 355 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 LARP4Q71RC2 724 aaKnown RBP eCLIP11.14□□□□□ -0.63
NDE1-206ENST00000572967 CISD2Q8N5K1 135 aaKnown RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 AMER3Q8N944 861 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 KCT2Q8NC54 265 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 RFWD2Q8NHY2 731 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 CHTF18Q8WVB6 975 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 WDR55Q9H6Y2 383 aaPredicted RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 DDX31Q9H8H2 851 aaKnown RBP11.14□□□□□ -0.63
NDE1-206ENST00000572967 LYRM4Q9HD34 91 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 PRDM9Q9NQV7 894 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 ASF1BQ9NVP2 202 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 TMEM45AQ9NWC5 275 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 CCL27Q9Y4X3 112 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 PTGDR2Q9Y5Y4 395 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 SCN3AQ9NY46 2000 aa11.14□□□□□ -0.63
NDE1-206ENST00000572967 IDSB3KWA1 339 aa11.13□□□□□ -0.63
NDE1-206ENST00000572967 E9PBE3 544 aa11.13□□□□□ -0.63
NDE1-206ENST00000572967 SLC22A2O15244 555 aa11.13□□□□□ -0.63
NDE1-206ENST00000572967 KLHL41O60662 606 aa11.13□□□□□ -0.63
NDE1-206ENST00000572967 PRMT3O60678 531 aa11.13□□□□□ -0.63
NDE1-206ENST00000572967 GALR3O60755 368 aaPredicted RBP11.13□□□□□ -0.63
NDE1-206ENST00000572967 HPP00738 406 aa11.13□□□□□ -0.63
NDE1-206ENST00000572967 JUNP05412 331 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms