RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 C2orf54Q08AI8 447 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 CDH17Q12864 832 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 GPS1Q13098 491 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 OLIG2Q13516 323 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TRA2AQ13595 282 aaKnown RBP eCLIP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 PRPSAP1Q14558 356 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 NR1D2Q14995 579 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TAF1AQ15573 450 aaPredicted RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TRADDQ15628 312 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 HENMT1Q5T8I9 393 aaKnown RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 PLAG1Q6DJT9 500 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 ERAP2Q6P179 960 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 CCDC121Q6ZUS5 278 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 NANOGNBQ7Z5D8 188 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 C17orf82Q86X59 251 aaPredicted RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 KLHL7Q8IXQ5 586 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 BBOF1Q8ND07 529 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 OR56A4Q8NGH8 313 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 IPCEF1Q8WWN9 437 aaPredicted RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 LRRC39Q96DD0 335 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 PDXPQ96GD0 296 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 HIST1H2AAQ96QV6 131 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 SMC6Q96SB8 1091 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 CGREF1Q99674 301 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TBL1YQ9BQ87 522 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TXLNGYQ9BZA5 131 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TRIM36Q9NQ86 728 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 ZNF580Q9UK33 172 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 PRELID1Q9Y255 219 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 CARD8Q9Y2G2 431 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 C15orf41Q9Y2V0 281 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 OR1A2Q9Y585 309 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TEX264Q9Y6I9 313 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 CACNA1DQ01668 2161 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TEX15Q9BXT5 2789 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 CREBBPQ92793 2442 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 IGLV3-16A0A075B6K0 115 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 IGHV5-10-1A0A0J9YXX1 117 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 ZCWPW2A0A1B0GU75 182 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 FAM237BA0A1B0GVD1 139 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TMEM247A6NEH6 219 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TMEM202A6NGA9 273 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 B4DGG1 531 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 SMIM24O75264 130 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 RECQL5O94762 991 aaPredicted RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 CLDN7O95471 211 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 FAM107AO95990 144 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 APRTP07741 180 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 PSG1P11464 419 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 FGF3P11487 239 aaPredicted RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 LIFP15018 202 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 ADRA1DP25100 572 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 NFKBIAP25963 317 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 UGT1A3P35503 534 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 ZNF140P52738 457 aaPredicted RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 LIMK2P53671 638 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 OR1D5P58170 312 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TUBA1BP68363 451 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 PMS2P11Q13670 270 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 ESPL1Q14674 2120 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 KPNB1Q14974 876 aaKnown RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TRIP13Q15645 432 aaPredicted RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 BCL2A1Q16548 175 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 KCTD19Q17RG1 926 aaPredicted RBP4.62□□□□□ -1.67
KARSP3-201ENST00000571212 KLHL22Q53GT1 634 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 CMPK2Q5EBM0 449 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 SH2D4BQ5SQS7 431 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 CFAP58Q5T655 872 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 ZDHHC20Q5W0Z9 365 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 STEAP4Q687X5 459 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 LRRC66Q68CR7 880 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 KCTD16Q68DU8 428 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 PDPK2PQ6A1A2 396 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 ZNF449Q6P9G9 518 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 NEK10Q6ZWH5 1172 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TUBA1AQ71U36 451 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 NLRP9Q7RTR0 991 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 GSTA5Q7RTV2 222 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 HSD11B1LQ7Z5J1 315 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TSPAN33Q86UF1 283 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 SFTPA2Q8IWL1 248 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 NDUFAF2Q8N183 169 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 OR2C3Q8N628 320 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 IPMKQ8NFU5 416 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 OR4D9Q8NGE8 314 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 OR52K1Q8NGK4 314 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 OR13J1Q8NGT2 312 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 FBXO25Q8TCJ0 367 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 ACMSDQ8TDX5 336 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 STYXQ8WUJ0 223 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 DTD2Q96FN9 168 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 LRRC46Q96FV0 321 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 SNF8Q96H20 258 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 COX14Q96I36 57 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 SLC45A3Q96JT2 553 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 TRAPPC9Q96Q05 1148 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 VPS35Q96QK1 796 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 SMIM14Q96QK8 99 aa4.62□□□□□ -1.67
KARSP3-201ENST00000571212 NUDT22Q9BRQ3 303 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms