RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 OR8D2Q9GZM6 311 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 GSTO2Q9H4Y5 243 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 BRF2Q9HAW0 419 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 KLHL1Q9NR64 748 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 TEX10Q9NXF1 929 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-220ENST00000569916 LRFN1Q9P244 771 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 ADAM29Q9UKF5 820 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 SNX6Q9UNH7 406 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 SLC12A4Q9UP95 1085 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 HIVEP3Q5T1R4 2406 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 DOPEY2Q9Y3R5 2298 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 GLOD5A6NK44 160 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 WASHC1A8K0Z3 465 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 MANBAO00462 879 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 ITGA10O75578 1167 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 ZFAND5O76080 213 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 MLYCDO95822 493 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 MYL2P10916 166 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 CD46P15529 392 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 ALOX15P16050 662 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-220ENST00000569916 TNNI3P19429 210 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 CRHR1P34998 444 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 CYB561P49447 251 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 PLIN5Q00G26 463 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 SRSF11Q05519 484 aaKnown RBP12.12□□□□□ -0.47
CNOT1-220ENST00000569916 SLC18A2Q05940 514 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 GALNT1Q10472 559 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-220ENST00000569916 LCP2Q13094 533 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 ELOAQ14241 798 aaKnown RBP12.12□□□□□ -0.47
CNOT1-220ENST00000569916 CCDC153Q494R4 210 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 C16orf47Q6ZP98 133 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-220ENST00000569916 DGAT2L6Q6ZPD8 337 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 GPRIN3Q6ZVF9 776 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 COMMD6Q7Z4G1 85 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 C4orf33Q8N1A6 199 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 HORMAD2Q8N7B1 307 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 TMEM178AQ8NBL3 297 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 DNAJB8Q8NHS0 232 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 ZNF721Q8TF20 911 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 UCN3Q969E3 161 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 CCDC126Q96EE4 140 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 C5orf34Q96MH7 638 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 DGAT2Q96PD7 388 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 C12orf65Q9H3J6 166 aaKnown RBP12.12□□□□□ -0.47
CNOT1-220ENST00000569916 AHSPQ9NZD4 102 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.12□□□□□ -0.47
CNOT1-220ENST00000569916 STK38LQ9Y2H1 464 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 V9GYY5 206 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-220ENST00000569916 PTPN13Q12923 2485 aa12.12□□□□□ -0.47
CNOT1-220ENST00000569916 LRRK2Q5S007 2527 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 SETXQ7Z333 2677 aaKnown RBP12.11□□□□□ -0.47
CNOT1-220ENST00000569916 ASPDHA6ND91 283 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 ESPNB1AK53 854 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 COPEO14579 308 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 NME2P1O60361 137 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 SLC25A12O75746 678 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 AGFG2O95081 481 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 GPR75O95800 540 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 CRYABP02511 175 aaKnown RBP12.11□□□□□ -0.47
CNOT1-220ENST00000569916 KRT6AP02538 564 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 KRT6BP04259 564 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 IGKV3-11P04433 115 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 KLK1P06870 262 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 SP1P08047 785 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 RNF224P0DH78 156 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 COX7A2P14406 83 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 KRT4P19013 534 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 NME2P22392 152 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 MST1P26927 711 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 CCT5P48643 541 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 KRT6CP48668 564 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 HTR6P50406 440 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 HLCSP50747 726 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 PKNOX1P55347 436 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 TBL3Q12788 808 aaKnown RBP12.11□□□□□ -0.47
CNOT1-220ENST00000569916 CSTF3Q12996 717 aaKnown RBP12.11□□□□□ -0.47
CNOT1-220ENST00000569916 BIKQ13323 160 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 OR52E8Q6IFG1 317 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 SLC25A25Q6KCM7 469 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 EMBQ6PCB8 327 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 HSDL2Q6YN16 418 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 PAGE2Q7Z2X7 111 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 GALNTL5Q7Z4T8 443 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 ST13P4Q8IZP2 240 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-220ENST00000569916 RIBC1Q8N443 379 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-220ENST00000569916 OR8K3Q8NH51 312 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 RDH11Q8TC12 318 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 AGAP11Q8TF27 550 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 CAVIN3Q969G5 261 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 PPWD1Q96BP3 646 aaKnown RBP12.11□□□□□ -0.47
CNOT1-220ENST00000569916 FRMD6Q96NE9 622 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 KCNA7Q96RP8 456 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 LIN28AQ9H9Z2 209 aaKnown RBP12.11□□□□□ -0.47
CNOT1-220ENST00000569916 WDR41Q9HAD4 459 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 MYOTQ9UBF9 498 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 GRID1Q9ULK0 1009 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 ZGRF1Q86YA3 2104 aa12.11□□□□□ -0.47
CNOT1-220ENST00000569916 RP1L1Q8IWN7 2480 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-220ENST00000569916 A0A1W2PS29 197 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 TLDC2A0PJX2 215 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms