RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 YTHDF3Q7Z739 585 aaKnown RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 TAC4Q86UU9 113 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 C12orf66Q96MD2 445 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 ZNF317Q96PQ6 595 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 ZNF717Q9BY31 904 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 POTEKPQ9BYX7 375 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MKRN2Q9H000 416 aaKnown RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 ACSS2Q9NR19 701 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MS4A12Q9NXJ0 267 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 PGPEP1Q9NXJ5 209 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 CUL9Q8IWT3 2517 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 A0A1W2PP55 124 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 OR14I1A6ND48 311 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 SMIM23A6NLE4 172 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MYO1GB0I1T2 1018 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 E5RJQ4 531 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 B4GALT3O60512 393 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 DPM1O60762 260 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 CDH16O75309 829 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 NR1D1P20393 614 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 AMPD1P23109 780 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 GSTM2P28161 218 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 SERPINB1P30740 379 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MSX2P35548 267 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 SPCS2Q15005 226 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 EMBQ6PCB8 327 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 PID1Q7Z2X4 250 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 RAB44Q7Z6P3 723 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 FAM129CQ86XR2 697 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 ZFP82Q8N141 532 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MREGQ8N565 214 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 NETO2Q8NC67 525 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 RNASE11Q8TAA1 199 aaKnown RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 AGAP11Q8TF27 550 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 KLHL6Q8WZ60 621 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MCUR1Q96AQ8 359 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 FBXO17Q96EF6 278 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 ZNF479Q96JC4 524 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 C12orf57Q99622 126 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 FOLH1BQ9HBA9 442 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 TMPRSS4Q9NRS4 437 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 FBXO34Q9NWN3 711 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MRPL22Q9NWU5 206 aaKnown RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 TNFRSF10DQ9UBN6 386 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 OR12D3Q9UGF7 316 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 KNTC1P50748 2209 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 KIR2DS5A0A0G2JLQ3 304 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 A0A0G2JNG1 304 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 A0A0U1RQV5 110 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 PRR23D1E9PI22 279 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 CCDC188H7C350 402 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 KIR2DS3K7RE56 304 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 FOXE1O00358 373 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 STC2O76061 302 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 HTR3BO95264 441 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 PRR23D2P0DMB1 279 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 IFI30P13284 250 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 NELFEP18615 380 aaKnown RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 FUT1P19526 365 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 PAICSP22234 425 aaKnown RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 CACNA2D1P54289 1103 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 PITX1P78337 314 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 GPLD1P80108 840 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MEF2AQ02078 507 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 TOP3AQ13472 1001 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 KIR2DS5Q14953 304 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 ZNF470Q6ECI4 717 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 KRT80Q6KB66 452 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 C22orf39Q6P5X5 142 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 BHLHB9Q6PI77 547 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 METAP1DQ6UB28 335 aaPredicted RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 CHMP1BQ7LBR1 199 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 SSX9Q7RTT3 188 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 KDM8Q8N371 416 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 METTL25Q8N6Q8 603 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 C19orf18Q8NEA5 215 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 OR2L3Q8NG85 312 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 PCDH19Q8TAB3 1148 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 WFDC12Q8WWY7 111 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 RIT1Q92963 219 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 C10orf90Q96M02 699 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 PAFAH2Q99487 392 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 IFT27Q9BW83 186 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 NRSN2Q9GZP1 204 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 LRMDAQ9H2I8 198 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 HIPK2Q9H2X6 1198 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 POLR1BQ9H9Y6 1135 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 UPB1Q9UBR1 384 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 LPAR3Q9UBY5 353 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 TDRD15B5MCY1 1934 aaKnown RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 EFCAB7A8K855 629 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 CENPBD1B2RD01 187 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 K7EQM0 130 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 TSPAN4O14817 238 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 POLR1CO15160 346 aaPredicted RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 AQP9O43315 295 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 TLX2O43763 284 aaPredicted RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 PIAS1O75925 651 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 WFS1O76024 890 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 OR6B1O95007 311 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms