RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 QSOX2Q6ZRP7 698 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 M1APQ8TC57 530 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 TWIST2Q8WVJ9 160 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 C10orf82Q8WW14 230 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 THOC1Q96FV9 657 aaKnown RBP13.57□□□□□ -0.24
COMMD4-225ENST00000569245 KCNC2Q96PR1 638 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 SERINC2Q96SA4 455 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 MEAF6Q9HAF1 191 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 PFDN4Q9NQP4 134 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 AGPAT4Q9NRZ5 378 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 DCTN4Q9UJW0 460 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 SNX6Q9UNH7 406 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 FIS1Q9Y3D6 152 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 TSC22D4Q9Y3Q8 395 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 TIMM22Q9Y584 194 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 COL12A1Q99715 3063 aa13.57□□□□□ -0.24
COMMD4-225ENST00000569245 RELNP78509 3460 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 A0A0G2JND7 137 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 SERTM1A2A2V5 107 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 A8MUA0 341 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 CLDN4O14493 209 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 WDPCPO95876 746 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 TGFB1P01137 390 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 KRT6AP02538 564 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 KRT6BP04259 564 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 CERS1P27544 350 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 SERPINB1P30740 379 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 KRT6CP48668 564 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 IDH3AP50213 366 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 MTTPP55157 894 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 TAS2R50P59544 299 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 BTKQ06187 659 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 SLC13A2Q13183 592 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 NR6A1Q15406 480 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 ZRSR2Q15696 482 aaKnown RBP13.56□□□□□ -0.24
COMMD4-225ENST00000569245 PDCD2Q16342 344 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-225ENST00000569245 CPSF6Q16630 551 aaKnown RBP eCLIP13.56□□□□□ -0.24
COMMD4-225ENST00000569245 ADPRMQ3LIE5 342 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 TMEM35AQ53FP2 167 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 C10orf62Q5T681 223 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-225ENST00000569245 CHSY3Q70JA7 882 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 LAS2Q8IYD9 372 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 FAM47BQ8NA70 645 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 SRFBP1Q8NEF9 429 aaKnown RBP13.56□□□□□ -0.24
COMMD4-225ENST00000569245 OR7G3Q8NG95 312 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 SUN3Q8TAQ9 357 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 HAS2Q92819 552 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 REPS1Q96D71 796 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 CMTM7Q96FZ5 175 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 MAELQ96JY0 434 aaKnown RBP13.56□□□□□ -0.24
COMMD4-225ENST00000569245 ZNF354BQ96LW1 612 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 QRFPRQ96P65 431 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 TMEM120AQ9BXJ8 343 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 NUF2Q9BZD4 464 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 ROGDIQ9GZN7 287 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 TUBB1Q9H4B7 451 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 MMP25Q9NPA2 562 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 NECTIN3Q9NQS3 549 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-225ENST00000569245 MRPS33Q9Y291 106 aaKnown RBP13.56□□□□□ -0.24
COMMD4-225ENST00000569245 PCDHGA11Q9Y5H2 935 aa13.56□□□□□ -0.24
COMMD4-225ENST00000569245 RP1L1Q8IWN7 2480 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 ASH1LQ9NR48 2969 aaKnown RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 TRAV17A0A0B4J275 112 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 SAP18O00422 153 aaKnown RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 MANBAO00462 879 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 SDHDO14521 159 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 PIP5K1BO14986 540 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 ULK1O75385 1050 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 SKAP2O75563 359 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 TBX6O95947 436 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 JUNP05412 331 aaKnown RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 TSFMP43897 325 aaKnown RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 TNFSF10P50591 281 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 LIM2P55344 173 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 RAB38P57729 211 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 SLC26A5P58743 744 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 PHEXP78562 749 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 UBAP2LQ14157 1087 aaKnown RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 ELOAQ14241 798 aaKnown RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 AP5B1Q2VPB7 878 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 XKR7Q5GH72 579 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 TCHHL1Q5QJ38 904 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-225ENST00000569245 ACER2Q5QJU3 275 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 FRG2Q64ET8 278 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 TRIM46Q7Z4K8 759 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 SLC5A8Q8N695 610 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 ANKS4BQ8N8V4 417 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 WDR20Q8TBZ3 569 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 ADAMTS18Q8TE60 1221 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 FRG2BQ96QU4 278 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 CENPKQ9BS16 269 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 TBCDQ9BTW9 1192 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 CCDC28BQ9BUN5 200 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 MS4A8Q9BY19 250 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 OR51B5Q9H339 312 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 ELOVL6Q9H5J4 265 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 PRTFDC1Q9NRG1 225 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 ABI3Q9P2A4 366 aa13.55□□□□□ -0.24
COMMD4-225ENST00000569245 ADGRE2Q9UHX3 823 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms